Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele16g1149 ATGGGTGCGAGTCGTAAACTTCAGGGTGAGATAGATCGTGTTCCGAAGAAGGTTCAAGAAGGCGTTGAAGCCTTCGATAGCATCTGGAAAAAGGTTCTTCTTCATTCTTTTCTTTCGTTATGGTTTACGATACTGAGAATGCGAACCAGAAGGAGAAATTTGAGGCAGACCAGAAGAAGTAGATTAAGAAGCTTCAGAGGTACAGAGACCAGATCAAGACCTGGATTCAGTCTAGTGAGATCATGGATAAGAAGTCCTCAATATGAAGTTTCCCAGCGGTTAGTCAGCAGGCTACCTAATATATCTGTTGCTTTATGGGGAAATTGGGTCACTAAATTTGTAAGTTGTGCTGAACTTTTAGTGGATGCCTCTTATGAGCAGGCCCTGGTGGGTGCTCGCAAACTCATTGAACGTGAAATGGAAAGATTTAAGATCTGTGAGAAGGAGACGAAGACCAATGCTTTCTCCAAAGAAGGCTTGGGTCAACTGCCCGAAATAGAGAGGGTGTTGGTCTGTGTGGGGTCTGAGCTTAGGATGCAAGATTGCTGTCATGAGGAGAGAGCTTTTCTCTCTCAAATGATAGAGGAGTTTTCTTCAATGTTTTTGCGTCCTTTGTTTTGGGTTGCAATCGACTGGTTTAGTGCTGAGCAGGTTAATGATGTCAGAGATTTCTTGGAAGACTATGTAGAGCGTAACCAGGAGGACTTTGATGAATTCAGTGATGTTGATGAGCTATACAGTTCATTACCTCTAGATAAGGTGGAGTCTCTTGAAGAACTTGGGAATACTTGTAGACATATAATGGGCACAGATGCTCTTAGCTTAAAGAATTCTGCGGTAGCACCAGCATCAGCGTCTCAGACATCTGTATGTATTTCTTGCTTTCTTGATCTGAATGTAATGGTCTGTATTTCTTCCCAGGATAGCAATTCTGATATTGGTGCCAGAACTCCACCTTCTAAAATTATCGGAATTAATTCTGCTACTTCATCAGCAGCTGATGAGAACCATAAAAGTACCTTGGAGAATTCTAGTGCTTCTAATTCTTCATCTTCTGTAAATCAGTCTAGCTCTTTAAAGGAAGAAGAAATTAATAGCTTCGCTGGACAGAGACCATCTCCATCGCTTTCTGATGCTGCGCTTGCAAGGGGCAATGGCAGAAACAGCCTGGCAAATCAAGCAACCTCTAGTATCCCTCTTGGTTCAGGAAACATTGTTTCCAGCAATGGGACCCTTGGTTCAGTCCCTTCAGCATCTGAAATAACAAAGAGAAACATATTGGGTGCTGATGGACTTGGAGGTGGTGGGATGGTGCAAACTCTTGTATCACCCCTTAGTAACAGAACAAACTTGCCTCAGGCTGCAAAGGGTAATGATGGAACTGCCTCATTTGATTCTGTAAATGTTAATGAGGCTGCAGCTGTCTCTGGGAGAGTTTTTTTCTTCTGTGGTTCCTGCTCTGCGATGGAGACATGGAAGCCCCTTCCAGAACCAGAATGA 1500 0.4327 MGASRKLQGEIDRVPKKVQEGVEAFDSIWKKVLLHSFLSLWFTILRMRTRRRNLRQTRRSRLRSFRGTETRSRPGFSLVRSWIRSPQYEVSQRLVSRLPNISVALWGNWVTKFVSCAELLVDASYEQALVGARKLIEREMERFKICEKETKTNAFSKEGLGQLPEIERVLVCVGSELRMQDCCHEERAFLSQMIEEFSSMFLRPLFWVAIDWFSAEQVNDVRDFLEDYVERNQEDFDEFSDVDELYSSLPLDKVESLEELGNTCRHIMGTDALSLKNSAVAPASASQTSVCISCFLDLNVMVCISSQDSNSDIGARTPPSKIIGINSATSSAADENHKSTLENSSASNSSSSVNQSSSLKEEEINSFAGQRPSPSLSDAALARGNGRNSLANQATSSIPLGSGNIVSSNGTLGSVPSASEITKRNILGADGLGGGGMVQTLVSPLSNRTNLPQAAKGNDGTASFDSVNVNEAAAVSGRVFFFCGSCSAMETWKPLPEPE 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele16g1149 499 MobiDBLite consensus disorder prediction 327 373 - -
Lele16g1149 499 PANTHER CCR4 NOT-RELATED 130 418 IPR040168 GO:0030015
Lele16g1149 499 Pfam Not1 N-terminal domain, CCR4-Not complex component 4 32 IPR007207 GO:0005634|GO:0006355
Lele16g1149 499 Pfam Not1 N-terminal domain, CCR4-Not complex component 127 198 IPR007207 GO:0005634|GO:0006355
Lele16g1149 499 MobiDBLite consensus disorder prediction 327 382 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele16g1149 Lele-ChrLele16 6435652 6439255 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele06g0494 06 3013234 3014957 Lele16g1149 16 6435652 6439255 CCT
Lele07g0706 07 4000122 4001799 Lele16g1149 16 6435652 6439255 CCT
Lele08g0504 08 3065839 3067562 Lele16g1149 16 6435652 6439255 CCT
Lele05g0675 05 3971701 3981846 Lele16g1149 16 6435652 6439255 CCT
Lele13g1326 13 23280813 23288994 Lele16g1149 16 6435652 6439255 hybridization