Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g0494 ATGGCCAAGGTTTTGAACCAGACTGGTTTGATTTCAAATTGGCATGATGATGTGCAACGCAAAATTTCTCTATGTCCAAAGATTCTCACTTATGATTCTCGTGTTTCTTGCCCCGTGAAGAGGTTTCCTTCTATCAAACTAAAATCCCAGGTTCTCAGATCTCCATCCTCTTCGTCTTCTGAACTCTATGGCAAAAACCTGGTGGTTCACAAGCATGCCCGCATGCCCGGCGGAGGAAAATCTCTTTCTCGATCTTCGTCGGCAGCTCAGGTGACCATTAGAATTGGGGACAAGCTGGTGGTTGTTGATTTCTTTTCTCCTGGTTGTGGTGGTTGCAGAGCTCTCCATCCTAAGATATGTCAACTGGCAGAGATGAATCCAGATGTTCAGTTTCTTCAAGTGAATTATGAGGAGCATAAATCTATGTGTTATAGTCTTAACGTCCACGTCCTTCCCTTCTTCCGCTTCTACAGAGGCGCCCATGGTCGTCTATGCAGCTTTAGCTGTACCAATGCCACGATCAAGAAGTTCAAAGATGCATTGGCCAAACACACCCCAGATAGATGCAGCTTGGGCCCAACCAGAGGGTTGGAGGAGAAAGAGCTGTTGGCTTTGTCTGCCAACAAGGATCTGTCATTTACTTACACCCCGAAACCAAATGAAGTGACGCATGAAGCCCCTCCACAGCCAGCTCCTCCTAGTTTGGGGCCCCTTCCATTAGCTTCAGTGAGGCCCAAGTCTCGCGAAGTGGAAAAGGAGAGAAGTCTGAGCACTGCTAGGCGTTGA 786 0.4771 MAKVLNQTGLISNWHDDVQRKISLCPKILTYDSRVSCPVKRFPSIKLKSQVLRSPSSSSSELYGKNLVVHKHARMPGGGKSLSRSSSAAQVTIRIGDKLVVVDFFSPGCGGCRALHPKICQLAEMNPDVQFLQVNYEEHKSMCYSLNVHVLPFFRFYRGAHGRLCSFSCTNATIKKFKDALAKHTPDRCSLGPTRGLEEKELLALSANKDLSFTYTPKPNEVTHEAPPQPAPPSLGPLPLASVRPKSREVEKERSLSTARR 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g0494 261 SUPERFAMILY Thioredoxin-like 96 184 IPR036249 -
Lele06g0494 261 Pfam Thioredoxin 93 161 IPR013766 -
Lele06g0494 261 PANTHER THIOREDOXIN, MITOCHONDRIAL 90 217 - -
Lele06g0494 261 MobiDBLite consensus disorder prediction 215 261 - -
Lele06g0494 261 Gene3D Glutaredoxin 82 187 - -
Lele06g0494 261 MobiDBLite consensus disorder prediction 223 239 - -
Lele06g0494 261 CDD TRX_family 97 159 - -
Lele06g0494 261 MobiDBLite consensus disorder prediction 245 261 - -
Lele06g0494 261 ProSiteProfiles Thioredoxin domain profile. 48 186 IPR013766 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g0494 Lele-ChrLele06 3013234 3014957 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele06g0494 06 3013234 3014957 Lele13g1326 13 23280813 23288994 CCT
Lele06g0494 06 3013234 3014957 Lele15g1117 15 6470472 6477373 CCT
Lele06g0494 06 3013234 3014957 Lele16g1149 16 6435652 6439255 CCT
Lele06g0494 06 3013234 3014957 Lele06g0494 06 3013234 3014957 ECH
Lele06g0494 06 3013234 3014957 Lele07g0706 07 4000122 4001799 hybridization
Lele06g0494 06 3013234 3014957 Lele08g0504 08 3065839 3067562 hybridization