Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele07g0706 ATGGCCAAGGTTTTGAACCAAACTGGTTTGATTTCAAATTGGCACGACGATGTGCAACAACATCTCCGCAAAATTTCTCTATGTCCAAAGATTCTTAGTTATGATTCTGGTGTTTCTTTCCCTGTGAAGAGGTTTCCTTCTCTCATACTAAAATCCCAGGTTCTCAGATCTCCATCCTCTTCGTCTTCTGAACTCTATGGCAAAAACCTGGTGTTTCCCGACTATGCTTGCATGCCCGGCAGAGCGAAATCTCTTTCTCGATCTTCGTCGCCCGCTCAGATGGCCCTTGGAATTGGTAAAGCTCAGAAATGGTGGGAAACAGGGCTTCAGCCAAATATGAGGGAGGTGACTTCGGCACAAGACCTTGTGGACTCCCTATTAAACGCAGGGGCTAAGCTGGTGGTTGTTGATTTCTTTTCTCCTGGTTGTGGTGGTTGCAGAGCTCTCCATCCTAAGATATGTCAACTGGCAGAGATGAATCCAGATGTTCAATTTCTTCAAGTGAATTATGAGGAGCATAAATCTATGTGTTATAGTCTTAACGTGCACGTCCTTCCCTTCTTTCGCTTCTACAGAGGCGCCCATGGTCGTTTATGCAGCTTTAGCTGTACCAATGCCACGATCAAGAAGTTCAAAGATGCATTGGCCAAACACACCCCGGATAGATGCAGCTTGGGCCCAACCAAAGGGTTGGAGGAGAAAGAGCTCTTAGCTCTGTCTGCCAACAAGGATCTGTCATTTACTTACACACCAAAACCAAATGAAGTCACGGATGAAGCCCCTGCACAGCCAGCTCCTCCTAGTCCGGAGCCCCTTCCATTAGCTTCAGGGAGCCCCAAGTCTCATGAAGTGGAAAAGGAGAGAAGTGTGAGCACGGCTGGGCGTTGA 888 0.4752 MAKVLNQTGLISNWHDDVQQHLRKISLCPKILSYDSGVSFPVKRFPSLILKSQVLRSPSSSSSELYGKNLVFPDYACMPGRAKSLSRSSSPAQMALGIGKAQKWWETGLQPNMREVTSAQDLVDSLLNAGAKLVVVDFFSPGCGGCRALHPKICQLAEMNPDVQFLQVNYEEHKSMCYSLNVHVLPFFRFYRGAHGRLCSFSCTNATIKKFKDALAKHTPDRCSLGPTKGLEEKELLALSANKDLSFTYTPKPNEVTDEAPAQPAPPSPEPLPLASGSPKSHEVEKERSVSTAGR 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele07g0706 295 FunFam Thioredoxin-like 1-2, chloroplastic 102 220 - -
Lele07g0706 295 SUPERFAMILY Thioredoxin-like 102 218 IPR036249 -
Lele07g0706 295 ProSiteProfiles Thioredoxin domain profile. 95 220 IPR013766 -
Lele07g0706 295 MobiDBLite consensus disorder prediction 280 295 - -
Lele07g0706 295 PANTHER THIOREDOXIN, MITOCHONDRIAL 81 251 - -
Lele07g0706 295 Gene3D Glutaredoxin 106 223 - -
Lele07g0706 295 CDD TRX_family 129 193 - -
Lele07g0706 295 Pfam Thioredoxin 124 195 IPR013766 -
Lele07g0706 295 MobiDBLite consensus disorder prediction 260 274 - -
Lele07g0706 295 MobiDBLite consensus disorder prediction 247 295 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele07g0706 Lele-ChrLele07 4000122 4001799 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele07g0706 07 4000122 4001799 Lele13g1326 13 23280813 23288994 CCT
Lele07g0706 07 4000122 4001799 Lele15g1117 15 6470472 6477373 CCT
Lele07g0706 07 4000122 4001799 Lele16g1149 16 6435652 6439255 CCT
Lele07g0706 07 4000122 4001799 Lele07g0706 07 4000122 4001799 ECH
Lele05g0671 05 3951691 3953348 Lele07g0706 07 4000122 4001799 hybridization
Lele06g0494 06 3013234 3014957 Lele07g0706 07 4000122 4001799 hybridization