Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g0504 ATGGCCAAGGTTTTGAACCAGACTGGTTTGATTTCAAATTGGCACAACGATGTGCAACAACATCTCCGCAAAATTTCTCTATGTCCAAAGATTCTCACTTATGATTCTCGTGTTTCTTGTCCCGTGAAGAGGTTTCCTTCTGTCAAACTAAAATCCCAGGTTCTCAGATCTCCATCCTCTTCGTCTTCTGAACTCTATGGCAAAAACCTGTTGGTTCACGAGCATGCTCGCATGCCCGGCGGAGGGAAATCTCTTTCTCGATCTTCGTTGGCTGCTCAGATGACCCTTAGAATTGGTAAAGCTCATAAATGGTGGGAAACAGGGCTTCAATCAAATATGAAGGAGGTGACTTCGGCCCAAGACCTTGTGGACTCCCTGTTAAACGCAGGGGACAAGCTGGTGGTTGTTGATTTCTTTTCTCCTGGTTGTGGTGGTTGCAGAGCTCTCCATCCTAAGATATGTCAACTGGCAGAGATGAATCCAGATGTTCAGTTTCTTCAAGTGAATTATGAGGAGCATAAATCTATGTGTTATAGTCTAAACGTCCACGTCCTTCCCTTCTTCCGCTTCTACAGAGGCGCCCATGGTCGTCTATGCAGCTTTAGCTGTACCAATGCCACGATCAAGAAGTTCAAAGATGCATTGGCCAAACACACCCCAGATAGATGCAGCTTGGGCCCAACCAGAGGGTTGGAGGAGAAAGAGCTCTTGGCTTTGTCTGCCAACAAGGATCTGTCATATACTTACACCCCAAAACCAAATGAAGTGACGCATGAAGCCCCTCCACAGCCAGCTCCTCCTAGTTTGGGGCCCCTTCCATTAGCTTCAGTGAGGCCCAAGTCTCGTGAAGTGGAAAAGGAGAGAAGTCTGAGCACCGCTAGGCGTTGA 888 0.4752 MAKVLNQTGLISNWHNDVQQHLRKISLCPKILTYDSRVSCPVKRFPSVKLKSQVLRSPSSSSSELYGKNLLVHEHARMPGGGKSLSRSSLAAQMTLRIGKAHKWWETGLQSNMKEVTSAQDLVDSLLNAGDKLVVVDFFSPGCGGCRALHPKICQLAEMNPDVQFLQVNYEEHKSMCYSLNVHVLPFFRFYRGAHGRLCSFSCTNATIKKFKDALAKHTPDRCSLGPTRGLEEKELLALSANKDLSYTYTPKPNEVTHEAPPQPAPPSLGPLPLASVRPKSREVEKERSLSTARR 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g0504 295 MobiDBLite consensus disorder prediction 279 295 - -
Lele08g0504 295 FunFam Thioredoxin-like 1-2, chloroplastic 102 220 - -
Lele08g0504 295 Gene3D Glutaredoxin 106 223 - -
Lele08g0504 295 SUPERFAMILY Thioredoxin-like 103 218 IPR036249 -
Lele08g0504 295 ProSiteProfiles Thioredoxin domain profile. 85 220 IPR013766 -
Lele08g0504 295 PANTHER THIOREDOXIN, MITOCHONDRIAL 73 251 - -
Lele08g0504 295 Pfam Thioredoxin 124 195 IPR013766 -
Lele08g0504 295 CDD TRX_family 129 193 - -
Lele08g0504 295 MobiDBLite consensus disorder prediction 248 295 - -
Lele08g0504 295 MobiDBLite consensus disorder prediction 257 273 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g0504 Lele-ChrLele08 3065839 3067562 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele08g0504 08 3065839 3067562 Lele13g1326 13 23280813 23288994 CCT
Lele08g0504 08 3065839 3067562 Lele15g1117 15 6470472 6477373 CCT
Lele08g0504 08 3065839 3067562 Lele16g1149 16 6435652 6439255 CCT
Lele08g0504 08 3065839 3067562 Lele08g0504 08 3065839 3067562 ECH
Lele05g0671 05 3951691 3953348 Lele08g0504 08 3065839 3067562 hybridization
Lele06g0494 06 3013234 3014957 Lele08g0504 08 3065839 3067562 hybridization