Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele16g0808 ATGGAAGAGACAAAATTAAGGTTCAAGCGTATTTGTGTTTTCTGTGGAAGCAGTTCTGGCAAGAAAGCTAGCTACCAGGAAGCTGCCGTTCAACTCGGCAAGGAACTGGTACACTTTAAATCATTCAAAACTTCTTTTGTGGAGCGAAGGATTGATTTGGTCTATGGAGGTGGAAGCGTGGGGTTGATGGGTCTCGTTTCTCAGGCAGTTCATGATGGTGGGCGCCATGTTCTAGGGTTTGTTCTTCTCTCTCCCCCCCCCTTCCTTCTGGTTATCCCAAAAACTCTAATGCCTAGAGAGATAACTGGTGATCCTATTGGAGAAGTAAGAACAGTATCTGACATGCATCAGAGAAAAGCTGAGATGGCTCGTCAAGCAGATGCCTTCATTGCCCTCCCAGGTGGCTATGGAACCCTTGAGGAATTGCTGGAAGTAATTACATGGGCTCAGCTTGGAATCCACCGCAAACCCGTAAGAAAACTATCCTCAGTTGTGGGGCTATTGAACGTGGATGGATACTACAATACCTTGTTGTCGTTCATTGATCAGGCCGTTGATGAAGGCTTTATATCCCCTACGGCACGTCGCATTATCGTGTCAGCCCCCACTGCCAGAGAATTGGTCAAAGAGCTCGAGGAACATGTACCTGAGCAAGACGAGGTGGTGGCCAAGTTGGTGTGGGAAGATAGAATAAACTTTGTGGCAGAATCAGAAGTTGCGATGTGA 726 0.4725 MEETKLRFKRICVFCGSSSGKKASYQEAAVQLGKELVHFKSFKTSFVERRIDLVYGGGSVGLMGLVSQAVHDGGRHVLGFVLLSPPPFLLVIPKTLMPREITGDPIGEVRTVSDMHQRKAEMARQADAFIALPGGYGTLEELLEVITWAQLGIHRKPVRKLSSVVGLLNVDGYYNTLLSFIDQAVDEGFISPTARRIIVSAPTARELVKELEEHVPEQDEVVAKLVWEDRINFVAESEVAM 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele16g0808 241 FunFam CASP-like protein 1 213 - -
Lele16g0808 241 Gene3D - 1 213 - -
Lele16g0808 241 PANTHER LOG FAMILY PROTEIN YJL055W 4 230 - -
Lele16g0808 241 SUPERFAMILY MCP/YpsA-like 7 214 - -
Lele16g0808 241 TIGRFAM TIGR00730: TIGR00730 family protein 9 212 IPR005269 GO:0009691|GO:0016787
Lele16g0808 241 Pfam Possible lysine decarboxylase 63 210 IPR031100 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele16g0808 Lele-ChrLele16 4524324 4527685 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele06g0887 06 5526578 5527277 Lele16g0808 16 4524324 4527685 CCT
Lele07g1064 07 6432924 6433644 Lele16g0808 16 4524324 4527685 CCT
Lele08g0876 08 5546286 5547004 Lele16g0808 16 4524324 4527685 CCT
Lele16g0808 16 4524324 4527685 Lele05g1033 05 6420734 6421069 CCT
Lele16g0808 16 4524324 4527685 Lele07g1072 07 6472826 6473161 CCT
Lele16g0808 16 4524324 4527685 Lele08g0884 08 5582222 5582557 CCT
Lele13g1622 13 25152576 25155981 Lele16g0808 16 4524324 4527685 hybridization
Lele14g1554 14 23527580 23530996 Lele16g0808 16 4524324 4527685 hybridization