Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele13g1622 ATGGAAGAGACAAAATCGAGGTTCAAGCGTATTTGTGTTTTCTGTGGAAGCAGTTCTGGCAAGAAAGCTAGCTATCAGGAAGCTGCCGTTCAACTTGGCCAGGAACTGGTGGAGCGAAGCATTGATTTGGTCTATGGAGGCGGAAGCGTGGGGTTGATGGGTCTCGTTTCTCAGGCAGTTCATGATGGTGGGCGCCATGTTCTAGGGGTTATCCCAAAAACTCTAATGCCTAGAGAGATCACTGGTGATCCTATTGGAGAAGTAAGAACCGTATCTGATATGCATCAGAGAAAAGCTGAGATGGCTCGTCAAGCAGATGCCTTCATTGCCCTCCCAGGTGGCTATGGAACCCTTGAAGAATTGCTGGAAGTAATTACATGGGCTCAGCTTGGAATCCACCGCAAACCCGTGGGGCTATTGAACGTGGATGGATACTACAATACCTTGTTGTCGTTCATTGATCAGGCCGTTGATGAAGGCTTTATCTCCCCTACGGCACGTCGAATTATCGTGTCAGCCCCCACTGCCAAAGAATTGGTCAAAGAGCTCGAGGAACACGTGCCTGAACAAGACGAGGTGGTGGCCAAGTTGGTGTGGGAGGATAGAATAAACTTCGTGGCAGAATCAGAAGTTGCGATGTGA 642 0.4907 MEETKSRFKRICVFCGSSSGKKASYQEAAVQLGQELVERSIDLVYGGGSVGLMGLVSQAVHDGGRHVLGVIPKTLMPREITGDPIGEVRTVSDMHQRKAEMARQADAFIALPGGYGTLEELLEVITWAQLGIHRKPVGLLNVDGYYNTLLSFIDQAVDEGFISPTARRIIVSAPTAKELVKELEEHVPEQDEVVAKLVWEDRINFVAESEVAM 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele13g1622 213 SUPERFAMILY MCP/YpsA-like 7 186 - -
Lele13g1622 213 TIGRFAM TIGR00730: TIGR00730 family protein 9 184 IPR005269 GO:0009691|GO:0016787
Lele13g1622 213 PANTHER LOG FAMILY PROTEIN YJL055W 3 202 - -
Lele13g1622 213 Gene3D - 1 185 - -
Lele13g1622 213 Pfam Possible lysine decarboxylase 53 182 IPR031100 -
Lele13g1622 213 FunFam CASP-like protein 1 185 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele13g1622 Lele-ChrLele13 25152576 25155981 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele06g0887 06 5526578 5527277 Lele13g1622 13 25152576 25155981 CCT
Lele07g1064 07 6432924 6433644 Lele13g1622 13 25152576 25155981 CCT
Lele08g0876 08 5546286 5547004 Lele13g1622 13 25152576 25155981 CCT
Lele13g1622 13 25152576 25155981 Lele05g1033 05 6420734 6421069 CCT
Lele13g1622 13 25152576 25155981 Lele07g1072 07 6472826 6473161 CCT
Lele13g1622 13 25152576 25155981 Lele08g0884 08 5582222 5582557 CCT
Lele13g1622 13 25152576 25155981 Lele15g0793 15 4559395 4562808 hybridization
Lele13g1622 13 25152576 25155981 Lele16g0808 16 4524324 4527685 hybridization