Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g0884 ATGAGTCGCAGAAATGGAAACGGCCGAAAGCTTGACTTGAAGCTGAACTTATCCCCACCGAGGGCTGACCGGAGACTGGAGTCGCCAAACCGATCGGCGACGGTGTCACCGATGTCGACGCCGAGCTCTTGCCTGTCGTCGGAGCTGAACCAAGAGGACGGGCAGCAGAGATACTCGCACAGCCCGGAAGCGACGTCGATGGTGCTAGTAGGCTGCCCGAGATGCCTCATGTACGTGATGCTCTCCGAGGATGATCCAAAGTGCCCAAAGTGCAAAAGCACCGTTTTGCTCGATTTCCTTCAAGACGGCAACAACCCCACCATTAGGAGGAGCTAG 336 0.5685 MSRRNGNGRKLDLKLNLSPPRADRRLESPNRSATVSPMSTPSSCLSSELNQEDGQQRYSHSPEATSMVLVGCPRCLMYVMLSEDDPKCPKCKSTVLLDFLQDGNNPTIRRS 111
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g0884 111 MobiDBLite consensus disorder prediction 1 62 - -
Lele08g0884 111 MobiDBLite consensus disorder prediction 1 28 - -
Lele08g0884 111 MobiDBLite consensus disorder prediction 29 62 - -
Lele08g0884 111 PANTHER PUTATIVE-RELATED 5 101 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g0884 Lele-ChrLele08 5582222 5582557 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele13g1622 13 25152576 25155981 Lele08g0884 08 5582222 5582557 CCT
Lele14g1554 14 23527580 23530996 Lele08g0884 08 5582222 5582557 CCT
Lele15g0793 15 4559395 4562808 Lele08g0884 08 5582222 5582557 CCT
Lele16g0808 16 4524324 4527685 Lele08g0884 08 5582222 5582557 CCT
Lele08g0884 08 5582222 5582557 Lele08g0884 08 5582222 5582557 ECH
Lele05g1033 05 6420734 6421069 Lele08g0884 08 5582222 5582557 hybridization