Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g0876 ATGTCACTGTACCAGTGGGACTTTGATACCCTTAATGCAATATGGACGAGAGAATCACCAGTTCCGATAGCTCGACACGGCAGATGTCCTGACCGACGCCTGAGCGGAGCTTGGTCAGATCTTCGATGCTTCCGTCGGTATCACTGGGAATTTGTTAAGAGAGCGGGGAAGGTTGAGCTGGCTGAACTGGACAGACCTTTCGTGAAGATTAGCCTCAAGGGTCGTTTTTGGCACAAGCGTTCCGATGTCCTCGCCAGAGTCGGTAATTATCTCAAGCAGAGGATTCCGGAGATTTTGGAGGTTGATATTGAGGATAAGAAACAATTGGATGATAGTCCTGGGAATTTTTGA 351 0.4843 MSLYQWDFDTLNAIWTRESPVPIARHGRCPDRRLSGAWSDLRCFRRYHWEFVKRAGKVELAELDRPFVKISLKGRFWHKRSDVLARVGNYLKQRIPEILEVDIEDKKQLDDSPGNF 116
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g0876 116 Gene3D - 49 103 IPR034904 -
Lele08g0876 116 SUPERFAMILY Fe-S cluster assembly (FSCA) domain-like 54 102 IPR034904 -
Lele08g0876 116 PANTHER OS09G0481800 PROTEIN 52 116 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g0876 Lele-ChrLele08 5546286 5547004 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele08g0876 08 5546286 5547004 Lele13g1622 13 25152576 25155981 CCT
Lele08g0876 08 5546286 5547004 Lele14g1554 14 23527580 23530996 CCT
Lele08g0876 08 5546286 5547004 Lele15g0793 15 4559395 4562808 CCT
Lele08g0876 08 5546286 5547004 Lele16g0808 16 4524324 4527685 CCT
Lele05g1026 05 6388173 6388886 Lele08g0876 08 5546286 5547004 hybridization
Lele06g0887 06 5526578 5527277 Lele08g0876 08 5546286 5547004 hybridization