Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g0887 ATGTTATCCATATCCGATCCTCCTAGTTTTGTGTTCTGTTCTGTTCTGTGCCTTCGTAGCCGCAAAATAGGAGCATGTCACTGTACCAGGAAGGTTGAGCTGGCAGAGCTGGACGGACCTTTCGTGAAGATTAGACTCAAGGGTCGTTTTGGGCACAAGCGTTCCGATGTCCTCGCCAGAGTCAGTACTTATCTCAAGCAGAGGATTCCGGAAATTTTGGAGGTTGATATTGAGGATGAGAAACAAGTGGATGATAGTCCTGAGGATTTTATGAGTTAG 279 0.4624 MLSISDPPSFVFCSVLCLRSRKIGACHCTRKVELAELDGPFVKIRLKGRFGHKRSDVLARVSTYLKQRIPEILEVDIEDEKQVDDSPEDFMS 92
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g0887 92 Gene3D - 25 77 IPR034904 -
Lele06g0887 92 PANTHER OS09G0481800 PROTEIN 28 90 - -
Lele06g0887 92 SUPERFAMILY Fe-S cluster assembly (FSCA) domain-like 31 76 IPR034904 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g0887 Lele-ChrLele06 5526578 5527277 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele06g0887 06 5526578 5527277 Lele13g1622 13 25152576 25155981 CCT
Lele06g0887 06 5526578 5527277 Lele14g1554 14 23527580 23530996 CCT
Lele06g0887 06 5526578 5527277 Lele15g0793 15 4559395 4562808 CCT
Lele06g0887 06 5526578 5527277 Lele16g0808 16 4524324 4527685 CCT
Lele06g0887 06 5526578 5527277 Lele07g1064 07 6432924 6433644 hybridization
Lele06g0887 06 5526578 5527277 Lele08g0876 08 5546286 5547004 hybridization