Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele14g1554 ATGGAAGAGACAAAATCAAGGTTCAAGCGTATTTGTGTTTTCTGTGGAAGCAGTTCTGGCAAGAAAGCTAGCTACCAGGAAGCTGCCGTTCAACTCGGCAAGGAACTGGTGGAGCGAAGGATTGATTTGGTCTATGGAGGTGGAAGCGTGGGGTTGATGGGGCTCGTTTCTCAGGCAGTTCATGATGGTGGGCGCCATGTTCTAGGGGTTATCCCAAAAACTCTAATGCCTAGAGAGATAACCGGTGATCCTATTGGAGAAGTAAGAACAGTATCTGACATGCATCAGAGAAAAGCTGAGATGGCACGTCAAGCAGATGCCTTCATTGCCCTCCCAGGTGGCTATGGAACCCTTGAGGAATTGCTGGAAGTAATTACATGGGCTCAGCTTGGAATTCACCGCAAACCCGTGGGGCTATTGAACGTGGATGGATACTACAATACCTTGTTGTCGTTCATTGATCAGGCCGTTGATGAAGGCTTTATCTCCCCTACGGCACGTCGCATTATCGTGTCAGCCCCAACTGCCAGAGAATTGGTCAAAGAGCTCGAGGAACATGTACCTGAGCAAGACGAGGTGGTGGCCAAGTTGGTGTGGGAAGATAGAATAAGCTTCGTGGCAGAATCAGAAGTTGCGATGTGA 642 0.4907 MEETKSRFKRICVFCGSSSGKKASYQEAAVQLGKELVERRIDLVYGGGSVGLMGLVSQAVHDGGRHVLGVIPKTLMPREITGDPIGEVRTVSDMHQRKAEMARQADAFIALPGGYGTLEELLEVITWAQLGIHRKPVGLLNVDGYYNTLLSFIDQAVDEGFISPTARRIIVSAPTARELVKELEEHVPEQDEVVAKLVWEDRISFVAESEVAM 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele14g1554 213 FunFam CASP-like protein 1 185 - -
Lele14g1554 213 SUPERFAMILY MCP/YpsA-like 7 186 - -
Lele14g1554 213 Pfam Possible lysine decarboxylase 53 182 IPR031100 -
Lele14g1554 213 Gene3D - 1 185 - -
Lele14g1554 213 TIGRFAM TIGR00730: TIGR00730 family protein 9 184 IPR005269 GO:0009691|GO:0016787
Lele14g1554 213 PANTHER LOG FAMILY PROTEIN YJL055W 3 202 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele14g1554 Lele-ChrLele14 23527580 23530996 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele06g0887 06 5526578 5527277 Lele14g1554 14 23527580 23530996 CCT
Lele07g1064 07 6432924 6433644 Lele14g1554 14 23527580 23530996 CCT
Lele08g0876 08 5546286 5547004 Lele14g1554 14 23527580 23530996 CCT
Lele14g1554 14 23527580 23530996 Lele05g1033 05 6420734 6421069 CCT
Lele14g1554 14 23527580 23530996 Lele07g1072 07 6472826 6473161 CCT
Lele14g1554 14 23527580 23530996 Lele08g0884 08 5582222 5582557 CCT
Lele14g1554 14 23527580 23530996 Lele15g0793 15 4559395 4562808 hybridization
Lele14g1554 14 23527580 23530996 Lele16g0808 16 4524324 4527685 hybridization