Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele16g0444 ATGGATGTGGCTGAGGAGCTGATCAAGAGCAGTGACGAAGACAGAGCACTAACATTCTTCGGATACGAAGCTATCTCTACCCCAAAGAAAAGTTTGTCTCCGAAGGACAAGATAGACTCAAAAGGCATTGGCCTCGCTCGTCTGGATGCACCTAAGAATGGTCACACTGATCAGAACTCTGCCCCACGAAATGTGTTGTTCGGAAAGAAGCTCAGGGTTAAAATCCCACCTACCCCTCCAATTCCATCTTCCTCTGGCTATGGGAATTCTGGAATTCATACAGGTATTATGTGTTTGAGTGAGATGGAGCTGTGTGAGGAGTATACTTCTGTGAAATCCCATGGGCCTAATCCAAGAACCACCCATATATTCGAGGATTATATAGTGAACACCAGCTATGTGACTTCTTCACCTCGTGATTACCACTCTGCTTCCGGGACTAATTTCCTGCGCTGGTGCTACTCCTGCAAGATGCAGCTCGATCACACCAAGGACATCTTTATTTATAGGTATCAACGTGAACTTGAAATTGGTCTGATAGGCGAGAGAGCTTTCTGCAGTCGAGAATGCCGATACAGAGAGATGGTATTAGACGGAGCAGAAATCTCAGAATATGATAGTAATTGGGTAATGAGAGTTCAGCAAGATTTTACCTTGAAATTTAGCAAAGCAAGGTCAACACTCTCAAATTCAAGGAAGATAGAGCCAGGCCAAGACAGAGAACAGATGCATTACCATGGGGCAGACAGCAATTCGTTTGGAACTTACTACGACGTAGCGTGA 783 0.4496 MDVAEELIKSSDEDRALTFFGYEAISTPKKSLSPKDKIDSKGIGLARLDAPKNGHTDQNSAPRNVLFGKKLRVKIPPTPPIPSSSGYGNSGIHTGIMCLSEMELCEEYTSVKSHGPNPRTTHIFEDYIVNTSYVTSSPRDYHSASGTNFLRWCYSCKMQLDHTKDIFIYRYQRELEIGLIGERAFCSRECRYREMVLDGAEISEYDSNWVMRVQQDFTLKFSKARSTLSNSRKIEPGQDREQMHYHGADSNSFGTYYDVA 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele16g0444 260 ProSiteProfiles Zinc finger FLZ-type profile. 148 202 IPR007650 -
Lele16g0444 260 PANTHER FCS-LIKE ZINC FINGER 8 20 201 IPR044593 -
Lele16g0444 260 Pfam zinc-finger of the FCS-type, C2-C2 143 199 IPR007650 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele16g0444 Lele-ChrLele16 2392313 2395233 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele05g1468 05 9419352 9423585 Lele16g0444 16 2392313 2395233 CCT
Lele16g0444 16 2392313 2395233 Lele05g1454 05 9329392 9332878 CCT
Lele16g0444 16 2392313 2395233 Lele06g1310 06 8391906 8395147 CCT
Lele16g0444 16 2392313 2395233 Lele07g1518 07 9328412 9333563 CCT
Lele16g0444 16 2392313 2395233 Lele08g1305 08 8338222 8343598 CCT
Lele16g0444 16 2392313 2395233 Lele16g0444 16 2392313 2395233 ECH
Lele13g1984 13 27266687 27268726 Lele16g0444 16 2392313 2395233 hybridization