Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g1454 ATGGAAACCAGGTTCTCAATCAATCCTCGCCGCCAGGAATATTTTCCGACCGGCGGAACCCATTTGCCGGAGAGCCCAAGAGTGCCAATGGAGTTTCTGTCGAGGTCATGGAGTGCCTCTGCTTTTGAGGTCTCCAAGGCTCTGGCTCCTCCTCCACCACCTCCTCCTTCTAGCAATGTGGCTTCCAAGTCTGCGAACCGGTCATCTTGTGGTGCTAGCTGTATGCCTGAAGATACAGCCGGCGAGTCTGAGGAGTTGTCAATAATACCTAGGAACCAGTTCTCTTTCGCCTCCTCTGCTACTTCTCAGCTTGTGCTTGAGCGCATTATGTCACAGTCCGTGAGAGAGGAAGTGTCGCCATTAACGTCAGGGAGACTCTCTCACAGCAGCGAACCCATGAACGGTGGTGGTTCGTTAACCGGAACAGATAGCCCACCAATTTCTCCGTCTGATGAATTTGACGACGTCGTTAAGTTTTTCCGCTCCAACAATTCCATACCTCCATTGTTCAATGGTGGACGGGGCAGCGGCGCGATAGGCGCGTTAGGTAATGGGACGCCCAGCGCAGGACCCAAGACAGTTGGGAGATGGTTGAAAGAGCGAAGAGAGAAGAAAAAAGAAGAGAGCAGAAGCCATAATGCTCAGCTACACGCCGCCGTTTCGGTGGCGGCAGTGGCCTCCGCTGTGGCAGCCATAGCAGCAGCAACGGCAGCTTCATCTGCGCCAAACAAAGATGAGAAAATGGCCAAAGCAGACATGGCTGTGGCATCCGCAGCGACATTAGTTGCAGCACAATGTGTAGAGGCCGCTGAATCAATGGGAGCCGAGAGAGACCACCTCGCTTCGGTGGTTAGTTCTGCCGTGAATGTTCGCTCTCACGACGACATTACCACTCTGACCGCCGCCGCCGCTACAGCTCTGAGAGGGGCAGCGACGTTGAAAGCAAGAGCATCGAAGGAAGTGTGGAATATTGCCGCGGTGACGCCATTGGAGAGAGGCGTAGGACTTGGGATATGTGGAAAAGGAGGCCAGAACACCAACAACAGTAACACAAGCACCAGTGATAGTGGAGAAATTGTCAACGTAGACAATTTTCTGGGTATCTGCAGCCAAGAACTCCTTGCTAGAGGCACTGAGCTGCTCAAACGGACCCGTAAAGGTGATCTTCACTGGAAAATTGTGTCTGTTTATATACATCGAACAGGGCAGGTCATGCTAAAAATGAAGAGCAAACATGTTGCAAAAACCATTACTAAAAAGAAGAAGAATGTGGTGCTAGATGTGTGCACGGATGTACCGGCATGGCCAGGAAGGCATTTGTTTGATGGGGGGGAACAACGACGGTACTTTGGGCTGAAGACAGAATGCAGGGGAACCGTGGAGTTCGAGTGTAAGAATCAGAGGGAGTATGATATCTGGACTTTAGGAGTTTCGAGGCTTCTATCTATTGTGGCGGAAACCAAGAACACCTGCGGGAATTGA 1482 0.5162 METRFSINPRRQEYFPTGGTHLPESPRVPMEFLSRSWSASAFEVSKALAPPPPPPPSSNVASKSANRSSCGASCMPEDTAGESEELSIIPRNQFSFASSATSQLVLERIMSQSVREEVSPLTSGRLSHSSEPMNGGGSLTGTDSPPISPSDEFDDVVKFFRSNNSIPPLFNGGRGSGAIGALGNGTPSAGPKTVGRWLKERREKKKEESRSHNAQLHAAVSVAAVASAVAAIAAATAASSAPNKDEKMAKADMAVASAATLVAAQCVEAAESMGAERDHLASVVSSAVNVRSHDDITTLTAAAATALRGAATLKARASKEVWNIAAVTPLERGVGLGICGKGGQNTNNSNTSTSDSGEIVNVDNFLGICSQELLARGTELLKRTRKGDLHWKIVSVYIHRTGQVMLKMKSKHVAKTITKKKKNVVLDVCTDVPAWPGRHLFDGGEQRRYFGLKTECRGTVEFECKNQREYDIWTLGVSRLLSIVAETKNTCGN 493
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g1454 493 PANTHER EXPRESSED PROTEIN 19 485 IPR040269 -
Lele05g1454 493 MobiDBLite consensus disorder prediction 116 150 - -
Lele05g1454 493 Pfam Plant pleckstrin homology-like region 379 484 IPR013666 -
Lele05g1454 493 MobiDBLite consensus disorder prediction 45 82 - -
Lele05g1454 493 MobiDBLite consensus disorder prediction 1 27 - -
Lele05g1454 493 Pfam Auxin canalisation 23 332 IPR008546 -
Lele05g1454 493 MobiDBLite consensus disorder prediction 116 147 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g1454 Lele-ChrLele05 9329392 9332878 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele13g1984 13 27266687 27268726 Lele05g1454 05 9329392 9332878 CCT
Lele16g0444 16 2392313 2395233 Lele05g1454 05 9329392 9332878 CCT
Lele05g1454 05 9329392 9332878 Lele05g1454 05 9329392 9332878 ECH
Lele05g1454 05 9329392 9332878 Lele07g1518 07 9328412 9333563 hybridization
Lele05g1454 05 9329392 9332878 Lele08g1305 08 8338222 8343598 hybridization