Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g1468 ATGAAACTCTGCGCTAATCACCAATCAAAGCAAGAAGCTTCGGGCAATGGGCGAACAGTGGCGCATCACGACAAGACTTTGGAGTCACCTGAAAGTGATGGGCAAGTGCAATCTTGTTTGACAGAGATAAGGGAAGAAGTGGGCCCAACACTGAGCAATATTGATGAAGAGAAAGAGAAGCAACCTCATTGGGTAGGGCCCACGCCTAACCCATTCTTGAGCGATACAAGTGTACGTCTTCAATCCATCTTCCACAAATTCAAAGATTCGGTTTTGCAGTTGAGATCACAGAACAAGAACTTGTATACGCTGATGATGAAAAGATCGAGAGCAGTGACCAAACCAGCTTTAATGGCTGATCAGAGCGGTCACCAATCATCTCCTAAGCATTATAAGTATGCTAGAGTTATTCAATCCTTCTTTGGGTCACCCAAATTTAAAGACTTTACCACCAAGTGTCTCTCTAGAGCTGAGGCCCTAAGAATCCCTAGTTCAATCTTTGACTCTATGCTATTACCTCCTTTTGGGACATTGTTCCCCAGAATTTCCTCGGAAAAGAAAAGCTCATGGAACAAGATAGATACCAGAGGCATTGGGATTGCTCTTGTTGATGAGGGTGCTGAAGAGAATTCTGATAAACCCAGCAGCAATGGAAATGTCCTGTTTGGAACACAGCTTAGAGTAAAAATCCCTCCCTTATCACCATTTACATTTTGTCCGTTTGAATCTCAAACAAGTTCGAATGGTGTTGGAACTAAAACCCAAAACTCGCTTGTATCGCCAACTGGGTCTCAAAGTTCAGAACTTTATGCAGAGGATTCTTCAAGGGTAGTATCCACAGGTGTTCTGTCTTTGAGTGAAATGGAGCTTTCTGAGGAGTACACTTGTGTAATATCTCATGGCCCTAATCCAAGAACCACTCATTTCTTTGATAATTGCGTTGTCAATGGCCATTGTTCTTTGCCTGGAAGGCCCCAGTCTGCTTCGGGGAATTTCCTCAGCTTCTGTTACACTTGCAACAAGCATCTTGAGCACACAGAGGACATCTTTATTTACAGAGGTGAGAAAGCTTTCTGCAGTCACGAGTGCCGGTGCCAAGAGATGATGGTGGACAGAGAAGAAAATTCAGAATCTGATATTTATCATCACCCTTGA 1155 0.4346 MKLCANHQSKQEASGNGRTVAHHDKTLESPESDGQVQSCLTEIREEVGPTLSNIDEEKEKQPHWVGPTPNPFLSDTSVRLQSIFHKFKDSVLQLRSQNKNLYTLMMKRSRAVTKPALMADQSGHQSSPKHYKYARVIQSFFGSPKFKDFTTKCLSRAEALRIPSSIFDSMLLPPFGTLFPRISSEKKSSWNKIDTRGIGIALVDEGAEENSDKPSSNGNVLFGTQLRVKIPPLSPFTFCPFESQTSSNGVGTKTQNSLVSPTGSQSSELYAEDSSRVVSTGVLSLSEMELSEEYTCVISHGPNPRTTHFFDNCVVNGHCSLPGRPQSASGNFLSFCYTCNKHLEHTEDIFIYRGEKAFCSHECRCQEMMVDREENSESDIYHHP 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g1468 384 Pfam zinc-finger of the FCS-type, C2-C2 326 373 IPR007650 -
Lele05g1468 384 ProSiteProfiles Zinc finger FLZ-type profile. 331 375 IPR007650 -
Lele05g1468 384 MobiDBLite consensus disorder prediction 47 68 - -
Lele05g1468 384 PANTHER FCS-LIKE ZINC FINGER 8 107 375 IPR044593 -
Lele05g1468 384 MobiDBLite consensus disorder prediction 49 63 - -
Lele05g1468 384 MobiDBLite consensus disorder prediction 1 20 - -
Lele05g1468 384 MobiDBLite consensus disorder prediction 246 271 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g1468 Lele-ChrLele05 9419352 9423585 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele05g1468 05 9419352 9423585 Lele13g1984 13 27266687 27268726 CCT
Lele05g1468 05 9419352 9423585 Lele16g0444 16 2392313 2395233 CCT
Lele13g1993 13 27313898 27317246 Lele05g1468 05 9419352 9423585 CCT
Lele14g1927 14 25646931 25650590 Lele05g1468 05 9419352 9423585 CCT
Lele15g0412 15 2362336 2365673 Lele05g1468 05 9419352 9423585 CCT
Lele16g0437 16 2344638 2349294 Lele05g1468 05 9419352 9423585 CCT
Lele05g1468 05 9419352 9423585 Lele05g1468 05 9419352 9423585 ECH
Lele05g1468 05 9419352 9423585 Lele07g1529 07 9416401 9418157 hybridization