Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g1305 ATGATACCTGACCTAACATATGTATGGAAATCTGTCATGAGACCGCCAAAATTGGCTCTGCTAAAACTTTTGTTTGGACTTGCTAACATGTCGGCCTTGGACGTTGCCAACTCTTACTGCATCAAGAAACACCCTTTGAAGCCATTTCGAAGCTCTGTACGATATCTACAGTTGGAACTTGGAACCTGCAAGTTCTCAATCAATCCTCGTCGCCAGGAATATTTTCCTACCGGCGGAACCCATTTGCCGGAGAGCCCAAGAGTGCCAATGGAGTTTCTGTCGAGGTCATGGAGTGCCTCAGCTTTTGAGGTCTCCAAGGCTCTGGCTCCTCCCCCACCTCCTCCTTCTTCTAGCAATGTGGCTTCCAAGCCTGCGAATGGGTCATCTTGTGGTGCTAGCTCTATTCCTGAAGATACCGCTGGCGAGTTTGAGGAGATGTCAATCATACCTCGGAACCAGTTCTCTTTCGCCTCCTCTGCTACTTCACAGCTTGTGCTTGAGCGCATTATGTCACAGTCCATGAGAGAGGAAGTGTCGCCATTGACGTCAGGGAGACTCTCTCACAGCAGCGAACCTATGAACGGTGCTGGTTCGTTAACCGGAACAGATAGCCCACCAATTTCTCCGTCGGATGAATTTGACGACGTCGTTAAGTTTTTCCGCGCCAACAATTCCATACACCCATTGTTTAATGGCGGACGAGGCAGCGGCGCGATAGGTAACGGGGCGCCCAGCTCAGGACCCAAGACAGTTGGGAGATGGTTGAAAGAGCGAAGAGAGAAGAAAAAAGAAGAGAGCAGAAGCCACAATGCTCAGCTACACGCCGCCGTATCGGTGGCAGCAGTGGCGTCCGCCGTGGCAGCCATAGCAGCGGCAACGGCAGCTTCATCTGCGCCAAACAAAGATGAGAAGATGGCCAAAACAGACATGGCGGTGGCATCCGCAGCGACATTAGTTGCAGCACAATGCGTAGAGGCTGCTGAATCAATGGGAGCTGAGAGAGACCACCTTGCTTCTGTGGTCAGTTCTGCCGTGAATGTTCGCTCTCACGACGACATTGCCACTCTTACCGCCGCCGCCGCTACAGCTCTGAGAGGGGCAGCGACGTTGAAAGCAAGAGCATTGAAGGAAGTGTGGAATATTGCGGCAGTGACGCCATTGGAGAGAGGGGTTGGACTTGGGATATGTGGAAAGGGCGGCCAAAACACCAATAACAGTAACACGAGCACCAGTGATAGTGGAGAAATTGTCAACGTAGACAATTTTCTGGGTATCTGCAGCCAAGAACTGCTAGCTAGAGGCACCGAACTGCTCAAACGCACCCGTAAAGGTGATCTTCATTGGAAGATTGTGTCTGTTTATATAAATCGAACAGGGCAGGTGATGCTTAAAATGAAGAGCAAACATGTTGCAAAAACCATTACTAAGAAGAAGAAGAATGTAGTGCTAGATGTCTGCACGGATGTACCGGCATGGCCGGGAAGGCATTTGTTTGATGGGGGAGAACAACGACGGTACTTTGGGTTGAAGACGGAATGCAGGGGAATCGTGGAGTTCGAGTGTAAGAATCAGAGGGAGTATGATATCTGGACTCAAGGAGTTTCAAGGCTTCTATCTATCGTGGCGGAAAGCAAAAACAGCTGCGAAAATTGA 1653 0.5027 MIPDLTYVWKSVMRPPKLALLKLLFGLANMSALDVANSYCIKKHPLKPFRSSVRYLQLELGTCKFSINPRRQEYFPTGGTHLPESPRVPMEFLSRSWSASAFEVSKALAPPPPPPSSSNVASKPANGSSCGASSIPEDTAGEFEEMSIIPRNQFSFASSATSQLVLERIMSQSMREEVSPLTSGRLSHSSEPMNGAGSLTGTDSPPISPSDEFDDVVKFFRANNSIHPLFNGGRGSGAIGNGAPSSGPKTVGRWLKERREKKKEESRSHNAQLHAAVSVAAVASAVAAIAAATAASSAPNKDEKMAKTDMAVASAATLVAAQCVEAAESMGAERDHLASVVSSAVNVRSHDDIATLTAAAATALRGAATLKARALKEVWNIAAVTPLERGVGLGICGKGGQNTNNSNTSTSDSGEIVNVDNFLGICSQELLARGTELLKRTRKGDLHWKIVSVYINRTGQVMLKMKSKHVAKTITKKKKNVVLDVCTDVPAWPGRHLFDGGEQRRYFGLKTECRGIVEFECKNQREYDIWTQGVSRLLSIVAESKNSCEN 550
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g1305 550 Pfam Auxin canalisation 83 389 IPR008546 -
Lele08g1305 550 Pfam Plant pleckstrin homology-like region 436 541 IPR013666 -
Lele08g1305 550 MobiDBLite consensus disorder prediction 120 135 - -
Lele08g1305 550 PANTHER EXPRESSED PROTEIN 79 542 IPR040269 -
Lele08g1305 550 MobiDBLite consensus disorder prediction 106 137 - -
Lele08g1305 550 MobiDBLite consensus disorder prediction 176 207 - -
Lele08g1305 550 MobiDBLite consensus disorder prediction 176 212 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g1305 Lele-ChrLele08 8338222 8343598 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele08g1305 08 8338222 8343598 Lele14g1905 14 25560195 25561306 CCT
Lele08g1305 08 8338222 8343598 Lele15g0425 15 2456669 2457134 CCT
Lele08g1305 08 8338222 8343598 Lele16g0455 16 2438204 2439864 CCT
Lele13g1984 13 27266687 27268726 Lele08g1305 08 8338222 8343598 CCT
Lele16g0444 16 2392313 2395233 Lele08g1305 08 8338222 8343598 CCT
Lele08g1305 08 8338222 8343598 Lele08g1305 08 8338222 8343598 ECH
Lele05g1454 05 9329392 9332878 Lele08g1305 08 8338222 8343598 hybridization
Lele06g1310 06 8391906 8395147 Lele08g1305 08 8338222 8343598 hybridization