Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele13g1984 ATGGTGAGCTTTGGTTTCCATGCACACGACTCTTTTGATTTTTTTCCATATAAATCTATCCAATTTGACCAAGATCAGAGAGAAGAGGGAGGGATGTTGCTGAGGAACAGATCAAGAGCAGTGACGAAGACAGGTTTGATGGCTGATCACAGCTCTCAGCCATCTCCAAAACAAAATTACGCGAGAGCTATTCCATCTTTATTTGGTTCGCCCAAATTCATCAGAGAATTGACCGGCAAGTGTGTCTCCGGAACAGAGGCTTTAAGAAGCCCAACTTCAATCCTGGACGCCAGAGCACTAACACCCTTCGGATACGAAGCTATCTCTACCCCAAAGAAAAGCTCGTCTCTGAAGGACAAGATAGACTCAAAAGGAGTTGGCCTTGCTCTCCTGGATGCACCTGGGAATGGTAACACTGATCAGAACTCTGCTCAGGGAAATTTATTGTTTGGAAATAAGCTCAGGGTAAAGATCCCACCTACCCCTCCAGTTCCATCTTCCTCTGGGTATGAGAATTCTGGAATTCATACGGGTGTTGTGTGTTTGAGTGAGATGGTGCTCTGTGAGGAGTATACTTGTGTGAAATCCCATGGGCCTAATCCAAGGACCACCCATATATTCGAGGATTACATCGTGAGCACCAACTCTGTGACTTCTTCCCATCGTGACTTCCACTCTGCTTCCGGGACTAATTTCCTCAGCTTGTGTTACTCCTGCAAGATGTGGCTCGATCACGCCAAGGACATCTTTATTTATAGAGGCGAGAGAGCTTTCTGCAGTCGAGAATGCCGATACAGAGAGATGATATTAGACGGAGCAGATATTTCAGAATTTGAGAGTAATTGGTGA 849 0.4558 MVSFGFHAHDSFDFFPYKSIQFDQDQREEGGMLLRNRSRAVTKTGLMADHSSQPSPKQNYARAIPSLFGSPKFIRELTGKCVSGTEALRSPTSILDARALTPFGYEAISTPKKSSSLKDKIDSKGVGLALLDAPGNGNTDQNSAQGNLLFGNKLRVKIPPTPPVPSSSGYENSGIHTGVVCLSEMVLCEEYTCVKSHGPNPRTTHIFEDYIVSTNSVTSSHRDFHSASGTNFLSLCYSCKMWLDHAKDIFIYRGERAFCSRECRYREMILDGADISEFESNW 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele13g1984 282 Pfam zinc-finger of the FCS-type, C2-C2 226 272 IPR007650 -
Lele13g1984 282 PANTHER FCS-LIKE ZINC FINGER 8 34 274 IPR044593 -
Lele13g1984 282 ProSiteProfiles Zinc finger FLZ-type profile. 231 275 IPR007650 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele13g1984 Lele-ChrLele13 27266687 27268726 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele05g1468 05 9419352 9423585 Lele13g1984 13 27266687 27268726 CCT
Lele13g1984 13 27266687 27268726 Lele05g1454 05 9329392 9332878 CCT
Lele13g1984 13 27266687 27268726 Lele06g1310 06 8391906 8395147 CCT
Lele13g1984 13 27266687 27268726 Lele07g1518 07 9328412 9333563 CCT
Lele13g1984 13 27266687 27268726 Lele08g1305 08 8338222 8343598 CCT
Lele13g1984 13 27266687 27268726 Lele13g1984 13 27266687 27268726 ECH
Lele13g1984 13 27266687 27268726 Lele16g0444 16 2392313 2395233 hybridization