Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g1310 ATGGAGACCAGGTTCTCAATCAATCCTCGTCACCAGGAATATTTTCCGAGCGGCGGAACCCATTTGCCGGAGAGCCCAAGAGTGCCAATGGAGTTTCTGTCGAGGTCATGGAGTGCCTCCGCTTTTGAGGTCTCCAAGGCTCTGGCTCCTCCACCACCTCCTCCTCCTCCTTCTAGCAATGTGGCTTCCAAGCCTGCGAATGGGTCATCTTGTGGTGCTAGCTGTATTCCTGAAGATACCGCTGGCAAGTTTGAGGAGATGTCAATCATACCTCGGAACCAGTTCTCTTTCGCCTCCTCTGCTACTTCCCAGCTTGTGCTTGAGCGCATTATGTCACAGTCAGTGAGAGAGGAAGTGTCGCCATTGACGTCAGGGAGACTCTCTCACAGCAGCGAACCTATGAACGGTGGTGGTTCGTTAACTGGAACAGATAGCCCACCAATTTCTCCGTCAGATGAGTTTGACGACGTCGTTAAGTTTTTCCGCTCCAACAATTCCATACACCCATTGTTTAATGGCGGACGAGGCAGCGGCGCGATAGGTAACGGGACGCCCAGCTCAGGACCCAAGACAGTTGGGAGATGGTTGAAAGAGCGAAGAGAGAAGAAAAAAGAAGAGAGCAGAAGCCACAATGCTCAGCTACACGCCGCCGTATCGGTGGCAGCAGTGGCGTCAGCCGTGGCAGCCATAGCAGCTGCAACGGCAGCTTCATCTGCGCCAAACAAAGATGAGAAGATGGCCAAAACAGACATGGCGGTGGCATCCGCAGCGACATTAGTTGCAGCACAATGCGTAGAGGCTGCTGAATCAATGGGAGCTGAGAGAGACCACCTTGCTTCTGTGGTCAGTTCTGCCGTGAATATTCGCTCTCACGACGACATTACCACTCTTACCGCCGCCGCCGCTACAGCTCTGAGAGGGGCAGCTACGTTGAAAGCAAGAGCACTGAAGGAAGTGTGGAATATTGCAGCAGTGACGCCATTGGAGAGAGGCGTGGGACTTGGGATATGTGGAAAAGGCGGCCAAAACACCAATAACAGTAACACGAGCACCAGTGATAGTGGAGAAATTGTCAACGTAGACAATTTTCTGGGTATCTGCAGCCAAGAACTGCTCGCTAGAGGCACCGAACTGCTCAAACGCACCCGTAAAGGTGATCTTCATTGGAAAATTGTGTCTGTTTATATACATCGATCAGGGCGGTTGATGCTTAAAATGAAGAGCAAACATGTTGCAAAAACCATTACTAAGAAGAAGAAGAATGCAGTGCTAGATGTATGCACGGATGTACCGGCATGGCCGGGAAGGCATTTGTTTGATGGGGGAGAACAACGACGGTACTTTGGGTTGAAGACGGAATGCAGGGGAATCGTGGAGTTTGAGTGTAAGAATCAGAGGGAGTATGATATCTGGACTCAAGGAGTTTCAAGGCTTCTATCTATTGTGGCGGAAAGCAAAAGCAGCTGTGGAAATTGA 1476 0.5081 METRFSINPRHQEYFPSGGTHLPESPRVPMEFLSRSWSASAFEVSKALAPPPPPPPPSSNVASKPANGSSCGASCIPEDTAGKFEEMSIIPRNQFSFASSATSQLVLERIMSQSVREEVSPLTSGRLSHSSEPMNGGGSLTGTDSPPISPSDEFDDVVKFFRSNNSIHPLFNGGRGSGAIGNGTPSSGPKTVGRWLKERREKKKEESRSHNAQLHAAVSVAAVASAVAAIAAATAASSAPNKDEKMAKTDMAVASAATLVAAQCVEAAESMGAERDHLASVVSSAVNIRSHDDITTLTAAAATALRGAATLKARALKEVWNIAAVTPLERGVGLGICGKGGQNTNNSNTSTSDSGEIVNVDNFLGICSQELLARGTELLKRTRKGDLHWKIVSVYIHRSGRLMLKMKSKHVAKTITKKKKNAVLDVCTDVPAWPGRHLFDGGEQRRYFGLKTECRGIVEFECKNQREYDIWTQGVSRLLSIVAESKSSCGN 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g1310 491 MobiDBLite consensus disorder prediction 116 148 - -
Lele06g1310 491 Pfam Plant pleckstrin homology-like region 377 482 IPR013666 -
Lele06g1310 491 MobiDBLite consensus disorder prediction 116 151 - -
Lele06g1310 491 MobiDBLite consensus disorder prediction 44 73 - -
Lele06g1310 491 MobiDBLite consensus disorder prediction 1 27 - -
Lele06g1310 491 Pfam Auxin canalisation 23 330 IPR008546 -
Lele06g1310 491 MobiDBLite consensus disorder prediction 172 193 - -
Lele06g1310 491 MobiDBLite consensus disorder prediction 47 61 - -
Lele06g1310 491 PANTHER EXPRESSED PROTEIN 19 483 IPR040269 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g1310 Lele-ChrLele06 8391906 8395147 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele06g1310 06 8391906 8395147 Lele14g1905 14 25560195 25561306 CCT
Lele06g1310 06 8391906 8395147 Lele15g0425 15 2456669 2457134 CCT
Lele06g1310 06 8391906 8395147 Lele16g0455 16 2438204 2439864 CCT
Lele13g1984 13 27266687 27268726 Lele06g1310 06 8391906 8395147 CCT
Lele16g0444 16 2392313 2395233 Lele06g1310 06 8391906 8395147 CCT
Lele06g1310 06 8391906 8395147 Lele06g1310 06 8391906 8395147 ECH
Lele06g1310 06 8391906 8395147 Lele07g1518 07 9328412 9333563 hybridization
Lele06g1310 06 8391906 8395147 Lele08g1305 08 8338222 8343598 hybridization