Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele15g1117 ATGGGTGCGAGTCGTAAACTTCAGGGTGAGATAGATCGTGTTCTGAAGAAGGTTCAAGAAGGCGTTGAAGTCTTCGATAGCATCTGGAAAAAGGTTTACGATACTGACAATGCGAACCAGAAGGAGAAATTTGAGGCGGACCTGAAGAAAGAGATTAAGAAGCTTCAGAGGTACAGAGATCAGATCAAGACCTGGATTCAGTCTAGCGAGATCAAGGATAAGAAGGTTAGTGCCTCTTATGAGCAGGCCCTGGTGGATGCTCGCAAACTCATTGAGCGTGAAATGGAAAGATTTAAGATCTGTGAGAAGGAGACGAAGACCAAAGCTTTCTCCAAAGAAGGCTTGGGCCAACAGCCCAAAACTGATCCTAAGGAGAAGGCTAAATCGGAGACTAGAGATTGGTTGAACAACGTGGTTGGAGAACTGGAATCTCAGATTGATAGCTTTGAAGCTGAGGTTGAAGGGCTTTCTGTCAAGAAAGGGAAGAATAGGCCACCTAGATTGATACATTTAGAGACATCAATTACTCGGCACAAGGCTCATATAAAGAAATGTGAATTACTTTTGAGGCTACTTGATAATGATGAGTTAAGTGCTGAGCAGGTTAATGATGTCAGAGATTTCTTGGAAGACTATGTAGAGCGTAACCAGGAGGACTTTGATGAATTCAGTGATGTTGATGAGCTATACAGTTCATTACCTCTAGATAAGGTGGAGTCTCTTGAAGATCTTGTTACAATTGGTCCCCCTGGTGTTGCTAAGGGCACAACTGCTCTTAGCGTAAAGAATTCTGTGGTAGCATCAGCATCAGCATCATCATCAGCGTCTCAGACATCTGAGCAAGCTGATGATACAGCTTCCCAGGATAGCAATTCTGATATCGGTGCAAGAACTCCACCTTCTAAAAGTATCGGAATTAATTCTGCTACCTCATCACCAGCTGGGAGCCATACAAGTCCTGTTTCTATGAATATTTTGGCTCATGACTTCTCCAGTGTGCCACCCATCACATCAATCCTTCCTGGTTCAAATTCTGTTCGGAGTACCTTGGAGAATTCTAATGCTTCTAATTTTTCATCTTCTGTAAATCAGTCTAGCCCTGTAAAGGAAGAAGAAATTAATAGCTTCCCTGGACAGAGACCATCTCCATCACTTTCTGATGCTGCACTTGCGAGGGGCATTGGCAGAAACAGCCTGGCAAATCAAGCAACCTCTAGTATCCCTCTTGGTTCAGGAAACATTGTTTCCAGCAATGGGGCCCTTGGTTCAGTCCCTTCAGCATCTGAAATACCAAAGAGAAGCATATTGAGTGCTGATGGACTAGGAGGTGGTGGCATGGTGCAACCTCTTGTAGCCCCCCATAGTAATAGAACAATCTTGCCTCAGGCTGCAAAGGGTAATGATGGAACTGCCTCATTTGATTCTGTAAGTGTTAATGAGGCTGCAGCTGTCTCTGGGAGAGTTTTTTCTTCTTCTGTGGTTCCTGGTCTGCAATGGAGACCTGGAAGCCCCTTCCAGAACCAGAATGAGATGGGGCAGCTTCGAGGAAGGACTGAAATAGCTCCTGATCAAAGAGAGAAATTTTTGCAGAAGTTTCAGCAAGTCCAGCAACAAGGGCACAATACCCTTCTTGGGATGCCGTCTCTTGGTGGAGGGAATCAAAAGCAATTTTCTCCGCAGAATCAAAATCCTCTATTGCAGCAGTTTAGCTCCCAGGGCTCTTCTATTTCCTCTCAATCTGGTCTGGGACTGGGAACCCAGGCGCCAGGATTCATTAGTATTCCGTCTACCTCACTACAGCTGACACCTAATTCGATCAATTCCTCATCTAACCAGCAGCAGTTGATTTCAGGTGTCTCTAAAGATGCTGATGTTGGCGACTATATGGTTGAAGACCAACAGCAACAGCAGAATTTTTCTGAAGAGCGTGCAACTGAATCTACTGCTAGTGCTGGGCTTGGCAAGAATCTTATAAACGAAGATGATTTGAGATCCACATATGTTGCAGATTCTCCCGCAGGATTATCTGGCTCTCTCCCAACAGACCCTGCTCAGACCTCCAGAGATACTGACTTGTCTCTTGGACAAACTTTACTATCCAATCAACCAGCTGGTAACCTTGGCGTCATTGGAAGGAGAGTTGGTGTTGACTTATCAAGTGTTAATTCTGGTGGATTGCGTGATCAGTTATATAATTTGCAGATGCTTGAGGCAGCTTATTACAAACTTCCACAACCCAAAGATTCGGAACGCCCAAGGACTTATGCTCCTAGGCATCCAACAATGACACCTCCTAGTTATCCTCAAGTACAAGCACCCATCATTAATAATCCTGCCTTTTGGGAGAGAGTAGGGCTCGAACCGTATGGAACTGACACCTTGTTTTTTGCATTCTATTATCAGCAGAATACGTATCAACAATATCTGGCTGCAAAAGAGCTAAAGAAGCAATGA 2454 0.445 MGASRKLQGEIDRVLKKVQEGVEVFDSIWKKVYDTDNANQKEKFEADLKKEIKKLQRYRDQIKTWIQSSEIKDKKVSASYEQALVDARKLIEREMERFKICEKETKTKAFSKEGLGQQPKTDPKEKAKSETRDWLNNVVGELESQIDSFEAEVEGLSVKKGKNRPPRLIHLETSITRHKAHIKKCELLLRLLDNDELSAEQVNDVRDFLEDYVERNQEDFDEFSDVDELYSSLPLDKVESLEDLVTIGPPGVAKGTTALSVKNSVVASASASSSASQTSEQADDTASQDSNSDIGARTPPSKSIGINSATSSPAGSHTSPVSMNILAHDFSSVPPITSILPGSNSVRSTLENSNASNFSSSVNQSSPVKEEEINSFPGQRPSPSLSDAALARGIGRNSLANQATSSIPLGSGNIVSSNGALGSVPSASEIPKRSILSADGLGGGGMVQPLVAPHSNRTILPQAAKGNDGTASFDSVSVNEAAAVSGRVFSSSVVPGLQWRPGSPFQNQNEMGQLRGRTEIAPDQREKFLQKFQQVQQQGHNTLLGMPSLGGGNQKQFSPQNQNPLLQQFSSQGSSISSQSGLGLGTQAPGFISIPSTSLQLTPNSINSSSNQQQLISGVSKDADVGDYMVEDQQQQQNFSEERATESTASAGLGKNLINEDDLRSTYVADSPAGLSGSLPTDPAQTSRDTDLSLGQTLLSNQPAGNLGVIGRRVGVDLSSVNSGGLRDQLYNLQMLEAAYYKLPQPKDSERPRTYAPRHPTMTPPSYPQVQAPIINNPAFWERVGLEPYGTDTLFFAFYYQQNTYQQYLAAKELKKQ 817
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele15g1117 817 MobiDBLite consensus disorder prediction 349 382 - -
Lele15g1117 817 MobiDBLite consensus disorder prediction 349 387 - -
Lele15g1117 817 Coils Coil 139 159 - -
Lele15g1117 817 MobiDBLite consensus disorder prediction 269 320 - -
Lele15g1117 817 MobiDBLite consensus disorder prediction 633 656 - -
Lele15g1117 817 MobiDBLite consensus disorder prediction 110 130 - -
Lele15g1117 817 MobiDBLite consensus disorder prediction 633 654 - -
Lele15g1117 817 Pfam NOT2 / NOT3 / NOT5 family 740 817 IPR007282 GO:0006355
Lele15g1117 817 Pfam Not1 N-terminal domain, CCR4-Not complex component 4 236 IPR007207 GO:0005634|GO:0006355
Lele15g1117 817 PIRSF NOT_su_3_5 1 817 IPR012270 GO:0006355|GO:0030015
Lele15g1117 817 Gene3D - 725 817 IPR038635 -
Lele15g1117 817 PANTHER CCR4 NOT-RELATED 24 817 IPR040168 GO:0030015
Lele15g1117 817 MobiDBLite consensus disorder prediction 668 690 - -
Lele15g1117 817 Coils Coil 41 61 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele15g1117 Lele-ChrLele15 6470472 6477373 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele06g0494 06 3013234 3014957 Lele15g1117 15 6470472 6477373 CCT
Lele07g0706 07 4000122 4001799 Lele15g1117 15 6470472 6477373 CCT
Lele08g0504 08 3065839 3067562 Lele15g1117 15 6470472 6477373 CCT
Lele05g0675 05 3971701 3981846 Lele15g1117 15 6470472 6477373 CCT
Lele13g1326 13 23280813 23288994 Lele15g1117 15 6470472 6477373 hybridization