Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele15g0364 ATGGAGAGAGTAAGAGATTTGGCATCAAACAGGGCCGCTGTAATATTCACAAAGAGCTCGTGTTGCATGTGCCACAGCATCAAGCAACTGTTCTATGATCTGGGAGCGAGCCCAGCAGTGCACGAGCTGGACACTGATGCATATGGGAGAGAAATGGAAAGGGCTTTGAGAGGGATGGGCTGTAACCCTTCGGTTCCAGCAGTGTTCATTGGAGGAAAATTCGTGGGCTCGGCCAAAGATATCATATCCCTCCACGTCGATGGTTCTCTCAAACAGATGCTCATAAATGCCAAGGCCATATGGTTTTAG 309 0.4887 MERVRDLASNRAAVIFTKSSCCMCHSIKQLFYDLGASPAVHELDTDAYGREMERALRGMGCNPSVPAVFIGGKFVGSAKDIISLHVDGSLKQMLINAKAIWF 102
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele15g0364 102 ProSiteProfiles Glutaredoxin domain profile. 1 101 - -
Lele15g0364 102 PRINTS Glutaredoxin signature 58 71 IPR014025 -
Lele15g0364 102 PRINTS Glutaredoxin signature 72 85 IPR014025 -
Lele15g0364 102 PRINTS Glutaredoxin signature 13 31 IPR014025 -
Lele15g0364 102 Gene3D Glutaredoxin 1 101 - -
Lele15g0364 102 TIGRFAM GlrX-like_plant: glutaredoxin-like family 4 101 IPR011905 -
Lele15g0364 102 SUPERFAMILY Thioredoxin-like 1 101 IPR036249 -
Lele15g0364 102 PANTHER GLUTAREDOXIN 1 101 IPR011905 -
Lele15g0364 102 Pfam Glutaredoxin 14 75 IPR002109 -
Lele15g0364 102 CDD GRX_GRXh_1_2_like 12 93 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele15g0364 Lele-ChrLele15 2087137 2087445 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele15g0364 1 102 Miscellaneous Gene Families AT4G15700 50.000 4.55e-37 119
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele06g1406 06 9065752 9067091 Lele15g0364 15 2087137 2087445 CCT
Lele07g1617 07 10007909 10011368 Lele15g0364 15 2087137 2087445 CCT
Lele08g1405 08 9006216 9009003 Lele15g0364 15 2087137 2087445 CCT
Lele05g1562 05 10008749 10009069 Lele15g0364 15 2087137 2087445 CCT
Lele15g0364 15 2087137 2087445 Lele15g0364 15 2087137 2087445 ECH
Lele13g2045 13 27596143 27596457 Lele15g0364 15 2087137 2087445 hybridization
Lele14g1976 14 25934178 25934492 Lele15g0364 15 2087137 2087445 hybridization