Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele07g1617 ATGATGGTTGCTCTGATGGAGGAGACCCAAGAATTGGAGAATAAGGCGAATGAAGAAGTGATTTCAGACAAAGAACCACAAAAGAAGGACGAAACCATTGATGAAGTGCTTTCACGGCACAGGAAAGAATTATCACAGCTGCAGAAGAAGGAAATTGAACTGAAAAAGGCGGCAGCTAGAGGTAGCAAGGCTGAGCAGAAAGCCAAGAAGAAGCAAGTGGAGGAACAGATTTCTCAACTTTCTGCCAGGCTTAAAGAGAAACATTCAGAAGAATTGTCCAGATTAGGCTTTAGCAGTAGTAATGGAAATGAAAAGAGCAGTTTGGATAGTTTGGTGAAGGCCATAGCTGGAGTCTCAGTTACCAGTCAACCTGATCATTCAAAGGTCAGCAAGGCCAAACAGAGGCGAGACAAAAGGGCTCAACAGGAAGCAGAAAGGGAGCAGAGAATCCAAGCTGAGCAAGATGACATTGTAAGTGACCGTATGGTCGAAAACGAGAAGTTGGAAAGAAAGCTGAAGCCTCTTGGTTTGACTGTCAGTGAAATAAAGCCAGACGGGCATTGTCTTTATAGAGCTGTTGAGGATCAGCTAACCCTCCTCTCAGGGGGCATATCTCCTTATACATACCAAGAACTCAGAGAAATGGCAGCGGAATATATGAGAAAGCATGCATCTGATTTCCTTCCATTTTTCCTGTCAGAGAATCTTGTAGAAGGTGATTCTGATAAATCCCTTGCCCAGAAGTTTGAAGATTACTGTAAAGAGGTGAAGTCAACCGCAATATGGGGCGGACAGCTAGAGCTTGGCGCCTTGACTCACTGCTTGAAAAAGCATATTATGATATTTTCAGGCTCCTTCCCAGACGTTGAGATGGGGAAAGAGTACAAATCTCAAGGCATCACCGATTCCTTGAATTCAAGTATCATGCTTTCATACCATAAGCACGCATTCGGACTAGGTGAGCATTACAATTCTTTGGTTCCAGACGCGATAAAATAG 999 0.4374 MMVALMEETQELENKANEEVISDKEPQKKDETIDEVLSRHRKELSQLQKKEIELKKAAARGSKAEQKAKKKQVEEQISQLSARLKEKHSEELSRLGFSSSNGNEKSSLDSLVKAIAGVSVTSQPDHSKVSKAKQRRDKRAQQEAEREQRIQAEQDDIVSDRMVENEKLERKLKPLGLTVSEIKPDGHCLYRAVEDQLTLLSGGISPYTYQELREMAAEYMRKHASDFLPFFLSENLVEGDSDKSLAQKFEDYCKEVKSTAIWGGQLELGALTHCLKKHIMIFSGSFPDVEMGKEYKSQGITDSLNSSIMLSYHKHAFGLGEHYNSLVPDAIK 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele07g1617 332 MobiDBLite consensus disorder prediction 11 34 - -
Lele07g1617 332 FunFam Cysteine proteinases superfamily protein 163 328 - -
Lele07g1617 332 Pfam OTU-like cysteine protease 183 323 IPR003323 -
Lele07g1617 332 Gene3D - 163 328 - -
Lele07g1617 332 Coils Coil 37 90 - -
Lele07g1617 332 MobiDBLite consensus disorder prediction 57 93 - -
Lele07g1617 332 SUPERFAMILY Cysteine proteinases 141 328 IPR038765 -
Lele07g1617 332 MobiDBLite consensus disorder prediction 128 150 - -
Lele07g1617 332 MobiDBLite consensus disorder prediction 119 150 - -
Lele07g1617 332 MobiDBLite consensus disorder prediction 57 105 - -
Lele07g1617 332 MobiDBLite consensus disorder prediction 1 34 - -
Lele07g1617 332 PANTHER OTU DOMAIN CONTAINING PROTEIN 38 328 - -
Lele07g1617 332 ProSiteProfiles OTU domain profile. 177 329 IPR003323 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele07g1617 Lele-ChrLele07 10007909 10011368 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele07g1617 07 10007909 10011368 Lele13g2045 13 27596143 27596457 CCT
Lele07g1617 07 10007909 10011368 Lele14g1976 14 25934178 25934492 CCT
Lele07g1617 07 10007909 10011368 Lele15g0364 15 2087137 2087445 CCT
Lele07g1617 07 10007909 10011368 Lele16g0382 16 2100809 2101123 CCT
Lele07g1617 07 10007909 10011368 Lele07g1617 07 10007909 10011368 ECH
Lele05g1561 05 10002932 10006217 Lele07g1617 07 10007909 10011368 hybridization
Lele06g1406 06 9065752 9067091 Lele07g1617 07 10007909 10011368 hybridization