Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g1562 ATGGAATTGATCAGGAGCATGGTAGCAGAGAAGCCAGTGGTAATATTCAGCAAGAGCAACTGTTGCTTGAGCTACTCCATTAAGTCACTGATAAGTGGTTTTGGGGCTAATGCGACTGTGTATGAGATTGATCAAATAAGCAATGGGAAGCAGATAGAAAGGGAATTGATTGAACTGGGATGTCAACCAAGCGTACCTGCTGTGTTCATAGGCCAAAACTTCATTGGTGGTGCCAACCAAATCATGAGCCTCCATGTTCGGAACGAGTTAGTCACTCTGCTCATGAACGCCAAAGCCATTTGGATTTGGAACAAAAAGTGA 321 0.4393 MELIRSMVAEKPVVIFSKSNCCLSYSIKSLISGFGANATVYEIDQISNGKQIERELIELGCQPSVPAVFIGQNFIGGANQIMSLHVRNELVTLLMNAKAIWIWNKK 106
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g1562 106 ProSiteProfiles Glutaredoxin domain profile. 1 101 - -
Lele05g1562 106 SUPERFAMILY Thioredoxin-like 1 101 IPR036249 -
Lele05g1562 106 PRINTS Glutaredoxin signature 58 71 IPR014025 -
Lele05g1562 106 PRINTS Glutaredoxin signature 13 31 IPR014025 -
Lele05g1562 106 PRINTS Glutaredoxin signature 72 85 IPR014025 -
Lele05g1562 106 Pfam Glutaredoxin 13 75 IPR002109 -
Lele05g1562 106 Gene3D Glutaredoxin 1 103 - -
Lele05g1562 106 PANTHER GLUTAREDOXIN 1 102 IPR011905 -
Lele05g1562 106 TIGRFAM GlrX-like_plant: glutaredoxin-like family 4 102 IPR011905 -
Lele05g1562 106 CDD GRX_GRXh_1_2_like 12 93 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g1562 Lele-ChrLele05 10008749 10009069 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele05g1562 1 102 Miscellaneous Gene Families AT4G15700 53.922 7.04e-40 126
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele05g1562 05 10008749 10009069 Lele13g2045 13 27596143 27596457 CCT
Lele05g1562 05 10008749 10009069 Lele14g1976 14 25934178 25934492 CCT
Lele05g1562 05 10008749 10009069 Lele15g0364 15 2087137 2087445 CCT
Lele05g1562 05 10008749 10009069 Lele16g0382 16 2100809 2101123 CCT
Lele05g1562 05 10008749 10009069 Lele07g1619 07 10017974 10018306 hybridization
Lele05g1562 05 10008749 10009069 Lele08g1406 08 9011131 9011451 hybridization