Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g1405 ATGGAGGACACCCAAGAATTGGAGAATAAGGCATATGAAGAAGTGATTACAGACAGAGAACCACAACAGAAGGAAGAAACTCTTGATGAAGTGCTTTCACGGCACAGGAAGGAATTATCAAAGCTGCAGAAGAAGGAAATTGAACTGAAAAATGCAGCAGCTAGAGGTAGCAAGGCTGAGCAGAAAGCCAAGAAGAAACAAGTGGAAGAACAGATTTCTCAACTTTCTGCGAAGCTTAAAGAGAAGCATGCAGAAGAATTGTCTAGATTAGGGTTTAGCAGTAGTAATGGAAATGAAAAGAGCAGTTTGGATAGTTTGGTGAAGGCCATAGCTGGAGTCTCAGTTACCAGTCAACCTGATCATTCAAAGGTCAGTAAGGCCAAACAGAGGCGAGACAAAAGGGCTCAACAGGAAGCAGAAAGGGAGCAAAGAATCCAAGCTGAGCAGAATGACATTGTAAGTGATCGTAGGGTCGAAAACGAGAAGTTGGAAAGAAAGCTGAAGCCTCTTGGTTTGACTGTCAGTGAAATAAAGCCAGATGGGCATTGTCTTTATAGAGCTGTTGAGGATCAGCTAGCCCTCCTCTCAGGGGGTACATCTCCTTATGCATACCAAGAACTTAGAGAAATGGCGGCGGAATATATGAGAAAGCATGCATCTGATTTCCTTCCATTTTTCCTGTCAGAGAATGTGGTAGAAGGTGATTCTGATGAATCCCTTGCCCAGAAGTTTGAAGATTACTGTAAAGAGGTGGAGGCAACAGCAATATGGGGCGGACAACTAGAGCTTGGTGCCTTGACTCACTGCTTGAAAAAGCATATTATGATATTTTCAGGCTCCTTCCCAGACGTTGAGATGGGGAAAGAGTACAAATCTCAAGGCGGCACCGATTCCTTGAATTCGAGTATCATGCTTTCATACCATAAGCACGCATTTGGACTAGGTGAGCATTACAATTCTTTGGTTGCAGGCTCAATAAAATAG 984 0.4339 MEDTQELENKAYEEVITDREPQQKEETLDEVLSRHRKELSKLQKKEIELKNAAARGSKAEQKAKKKQVEEQISQLSAKLKEKHAEELSRLGFSSSNGNEKSSLDSLVKAIAGVSVTSQPDHSKVSKAKQRRDKRAQQEAEREQRIQAEQNDIVSDRRVENEKLERKLKPLGLTVSEIKPDGHCLYRAVEDQLALLSGGTSPYAYQELREMAAEYMRKHASDFLPFFLSENVVEGDSDESLAQKFEDYCKEVEATAIWGGQLELGALTHCLKKHIMIFSGSFPDVEMGKEYKSQGGTDSLNSSIMLSYHKHAFGLGEHYNSLVAGSIK 327
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g1405 327 MobiDBLite consensus disorder prediction 49 88 - -
Lele08g1405 327 ProSiteProfiles OTU domain profile. 172 324 IPR003323 -
Lele08g1405 327 MobiDBLite consensus disorder prediction 114 149 - -
Lele08g1405 327 PANTHER OTU DOMAIN CONTAINING PROTEIN 33 322 - -
Lele08g1405 327 SUPERFAMILY Cysteine proteinases 135 322 IPR038765 -
Lele08g1405 327 MobiDBLite consensus disorder prediction 49 100 - -
Lele08g1405 327 Gene3D - 158 323 - -
Lele08g1405 327 Coils Coil 25 85 - -
Lele08g1405 327 MobiDBLite consensus disorder prediction 123 149 - -
Lele08g1405 327 MobiDBLite consensus disorder prediction 1 34 - -
Lele08g1405 327 FunFam Cysteine proteinases superfamily protein 158 323 - -
Lele08g1405 327 Pfam OTU-like cysteine protease 178 318 IPR003323 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g1405 Lele-ChrLele08 9006216 9009003 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele08g1405 08 9006216 9009003 Lele13g2045 13 27596143 27596457 CCT
Lele08g1405 08 9006216 9009003 Lele14g1976 14 25934178 25934492 CCT
Lele08g1405 08 9006216 9009003 Lele15g0364 15 2087137 2087445 CCT
Lele08g1405 08 9006216 9009003 Lele16g0382 16 2100809 2101123 CCT
Lele08g1405 08 9006216 9009003 Lele08g1405 08 9006216 9009003 ECH
Lele05g1561 05 10002932 10006217 Lele08g1405 08 9006216 9009003 hybridization
Lele06g1406 06 9065752 9067091 Lele08g1405 08 9006216 9009003 hybridization