Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele13g2045 ATGGAGATAGTGGGGAGGTTGATTGCAGACAAGCCGGTGGTGATATTCAGCAAGAGCAGTTGCTGCATGAGCCACACGGTGAAGGCTCTGATATGCAACTTTGGAGCGAACCCAACAGTGATAGAGCTTGACAAATTGCCAAGTGGGCAGCAGGAGCAGGTGGAGGCGGCGCTCCTCCAGTTGGGTTGCAGCCCGAGCGTGCTGGCCGTCTTCATAGGCCAACAATTCATTGGTGGCGCCGCCCAAGTTATCAGTCTCAACGTTCAAAACAAGCTTAACCAGCTGCTTTTAAAGGCTCGAGCCATTTTTGTCTAA 315 0.5238 MEIVGRLIADKPVVIFSKSSCCMSHTVKALICNFGANPTVIELDKLPSGQQEQVEAALLQLGCSPSVLAVFIGQQFIGGAAQVISLNVQNKLNQLLLKARAIFV 104
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele13g2045 104 ProSiteProfiles Glutaredoxin domain profile. 1 103 - -
Lele13g2045 104 PANTHER GLUTAREDOXIN 1 103 IPR011905 -
Lele13g2045 104 TIGRFAM GlrX-like_plant: glutaredoxin-like family 4 103 IPR011905 -
Lele13g2045 104 CDD GRX_GRXh_1_2_like 12 95 - -
Lele13g2045 104 Gene3D Glutaredoxin 2 103 - -
Lele13g2045 104 SUPERFAMILY Thioredoxin-like 2 101 IPR036249 -
Lele13g2045 104 Pfam Glutaredoxin 13 77 IPR002109 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele13g2045 Lele-ChrLele13 27596143 27596457 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele13g2045 1 104 Miscellaneous Gene Families AT4G15690 51.923 6.76e-34 111
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele06g1406 06 9065752 9067091 Lele13g2045 13 27596143 27596457 CCT
Lele07g1617 07 10007909 10011368 Lele13g2045 13 27596143 27596457 CCT
Lele08g1405 08 9006216 9009003 Lele13g2045 13 27596143 27596457 CCT
Lele05g1562 05 10008749 10009069 Lele13g2045 13 27596143 27596457 CCT
Lele13g2045 13 27596143 27596457 Lele13g2045 13 27596143 27596457 ECH
Lele13g2045 13 27596143 27596457 Lele15g0364 15 2087137 2087445 hybridization
Lele13g2045 13 27596143 27596457 Lele16g0382 16 2100809 2101123 hybridization