Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g1406 ATGCGTAGACTTGCACGCACACACATGCTTTCACAAGACAGAATTCTGTACTTGCGCATGCATGCAGCATGGTACAAAGCTCACAAGTCGCAAAATGGCATTAAGCACATGCACTTACACACTCTCAAACATGATATGACACCACACCATGTCCATGCAGTTTCATATAGACACTATATGACAACACCGCATGCACATTTATATACACACCACACAATATCATACCTTGAACAGGTTCTTTATTGCTTCTTTTGGTTATCCCATGATGTAAATGCGCGCAGGAAAGAATTATCAAAGCTGCAGAAGAAGGAAATTGAACTGAAAAATGCAGCAGCTAGAGGTAGCAAGGCTGAGCAGAAAGCCAAGAAGAAGCAAGTGGAAGAACAGATTTCTCAACTTTCTGCCAAGCTTAAAGAGAAGCAGGCAGAAGAATTGTCTAGATTAGGGTTTAGCAGTAGTAATGGAAATGAAAAGGGCAGTTTGGATAGTTTGGTGAAGGCCATAACTGGAGTCTCAGTTACCAGTCAACCTGATCATTCAAAGGTTAGCAAGGCCAAACAGAGGCGAGACAAAAGGGCTCAACAGGAAGCAGAAAGGGAGCAAAGAATCCAAGCTGAGCAGAATGACATTGTAAGTGATCGTATTGTCGAAAATGAGAAGTTGGAAAGAAAGCTGAAGCCTCTTGGTTTGACTGTCAGTGAAATGAAGCCAGATGGGCATTGTCTTTATAGAGCTGTTGAGGATCAGCTAGCCCTCCTCTCAGTGGGTACATCTCCTTATACATACCAAGAACTTAGAGAAATGGCGGCGGAATATATGAGAAAGCATGCATCTGATTTCCTTCCATTTTTCCTATCAGAGAATGTGGTAGAAGGTGATTCTGATGAATCCCTTGCCCAGAAGTTTGAAGATTACTGTAAAGAGGTGGAGTCAACAGCAATATGGGGCGGACAACTAGAGCTTGGTGCCTTGACTCACTGCTTGAAAAAGCATATTATGATATTTTCAGGCTCCTTCCCAGACGTTGAGATGGGTAAAGAGTACAAATCTCAAGGCGGCACCGATTCCTCGAATTCGAGTATCATGCTTTCATACCATAAGCACGCATTTGGACTAGGTGAGCATTACAATTCTTTGGTTGCGGACTCAATAAAATAG 1158 0.4266 MRRLARTHMLSQDRILYLRMHAAWYKAHKSQNGIKHMHLHTLKHDMTPHHVHAVSYRHYMTTPHAHLYTHHTISYLEQVLYCFFWLSHDVNARRKELSKLQKKEIELKNAAARGSKAEQKAKKKQVEEQISQLSAKLKEKQAEELSRLGFSSSNGNEKGSLDSLVKAITGVSVTSQPDHSKVSKAKQRRDKRAQQEAEREQRIQAEQNDIVSDRIVENEKLERKLKPLGLTVSEMKPDGHCLYRAVEDQLALLSVGTSPYTYQELREMAAEYMRKHASDFLPFFLSENVVEGDSDESLAQKFEDYCKEVESTAIWGGQLELGALTHCLKKHIMIFSGSFPDVEMGKEYKSQGGTDSSNSSIMLSYHKHAFGLGEHYNSLVADSIK 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g1406 385 Gene3D - 216 381 - -
Lele06g1406 385 Coils Coil 93 143 - -
Lele06g1406 385 ProSiteProfiles OTU domain profile. 230 382 IPR003323 -
Lele06g1406 385 SUPERFAMILY Cysteine proteinases 193 380 IPR038765 -
Lele06g1406 385 FunFam Cysteine proteinases superfamily protein 216 381 - -
Lele06g1406 385 Pfam OTU-like cysteine protease 236 376 IPR003323 -
Lele06g1406 385 PANTHER OTU DOMAIN CONTAINING PROTEIN 103 380 - -
Lele06g1406 385 MobiDBLite consensus disorder prediction 181 203 - -
Lele06g1406 385 MobiDBLite consensus disorder prediction 175 203 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g1406 Lele-ChrLele06 9065752 9067091 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele06g1406 06 9065752 9067091 Lele13g2045 13 27596143 27596457 CCT
Lele06g1406 06 9065752 9067091 Lele14g1976 14 25934178 25934492 CCT
Lele06g1406 06 9065752 9067091 Lele15g0364 15 2087137 2087445 CCT
Lele06g1406 06 9065752 9067091 Lele16g0382 16 2100809 2101123 CCT
Lele06g1406 06 9065752 9067091 Lele06g1406 06 9065752 9067091 ECH
Lele06g1406 06 9065752 9067091 Lele07g1617 07 10007909 10011368 hybridization
Lele06g1406 06 9065752 9067091 Lele08g1405 08 9006216 9009003 hybridization