Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele13g2193 ATGGCTTCTCACAACCACTGTCATAATCACAGAAAGGACGATAACAACCTCAACGGCGACAATTCCGTTTCTCATGTACACAAAAAACCCAAGCTCGGCTCGTTCATTACTGACTCCGAAATTCAATCCGAATTCGCTCACCATGACCCCGCCGTTGCTCGGATTAACAACGGTAGCTTCGGTTGCTGCCCTGCTTCTGTAATTGCCGCTCAGCAAGAACTGCAGCTGAAGAATCTCCGCCAGCCGGACCATTTCTACTTCAACGAGCTCCAGAAGGGGATTCTTCATTCCAGGACTCTTATCCGAGAAATTATTAATGCTGACCACGTCGATGAGATTTCTATAGTTGATAACGCCACCACAGCTGCTGCTATCGTCCTTCAGCAGACTGCCTGGGCCTTTCAAGAAGGAAAATTTCAAAGGGGGGACGTCGTTGTGATGCTTCATTGCGCTTACGGCAGCATCAAGAAGTCCATGGAGGCATATGTTACGCGCGCCGGAGGCGAAGTTATTCAGGTTCAGCTGCCTTTTCCTGTGAATTCTAATGAGGAGATTATTAGTGAATTTAGGAGAGCGCTGGAGAGAGGAAAAGCTGGCGGGAGCAGGGTTAGGCTAGCTGTGATTGATCACGTCACTTCAATGCCGTGTGTGGTGATCCCTGTTAGGGATTTGGTAAAGATTTGTAGGGAAGAAGGCGTTGAACAAGTTTTCGTGGACGCAGCTCATGGTATTGGGTGTACTGATGTTGATATGAAAGAGATCGGGGCAGACTTTTATACCAGTAATTTGCATAAATGGTTCTTTTGCCCACCTTCCATTGCCTTTCTGTACAGTTGGAAGTCGCCCAGATGCTCTGAATTGCATCATCCCGTGGTGTCCCATGAGTATGGTAATGGGTTGGCCGTCGAAAGTGCTTGGATTGGCACAAGAGATTACAGTGCACAATTGGTGGTTCCCGCAGTTTTGGAATTTATCAGTAGATTTGAAGACGGTATTGAAGGAATCAAGAAGAGGAATCATGAAGCTGTCGTGGAGATGGGACGAATGTTGGCCACAGCATGGGGAACTCAACTTGGTAGTCCTCCAGATATGTGTGCGAGCATGATTATGGTAGGGTTACCTGCTTGCTTGGGTATATTGAGCGATTCTGATGCTGAGAACCTAAGAGGACTTTTGAGGGATGATTTTGGCGTTGAAGTGCCTCTATATTATCGGCAACCAAAAGATGGAGAAACTGGACCAGTAACTGGATATGCCCGAATTTCTCATCAAGTTTACAATAAAGCTGATGATTATTACAAGTTCAGGGATGCAATTAATCAACTTGTGCGCAATAAGTTCACTTGTGCCCTTCTTTCTAATTTAAGAGTGCAGGGAAGGGGTGTAGGAATCTTGCAAATGAATAAGGGCTATAATTCAGCACCTTGCGAATGCTGGGCCAGTTATGATGGTTTTGGTACCATGAAGTTTGTAATAAGTTGTAGAGATAGTGCAGCAAGGTGTCGAGTTAGCGCGGTGAGCTGA 1524 0.4613 MASHNHCHNHRKDDNNLNGDNSVSHVHKKPKLGSFITDSEIQSEFAHHDPAVARINNGSFGCCPASVIAAQQELQLKNLRQPDHFYFNELQKGILHSRTLIREIINADHVDEISIVDNATTAAAIVLQQTAWAFQEGKFQRGDVVVMLHCAYGSIKKSMEAYVTRAGGEVIQVQLPFPVNSNEEIISEFRRALERGKAGGSRVRLAVIDHVTSMPCVVIPVRDLVKICREEGVEQVFVDAAHGIGCTDVDMKEIGADFYTSNLHKWFFCPPSIAFLYSWKSPRCSELHHPVVSHEYGNGLAVESAWIGTRDYSAQLVVPAVLEFISRFEDGIEGIKKRNHEAVVEMGRMLATAWGTQLGSPPDMCASMIMVGLPACLGILSDSDAENLRGLLRDDFGVEVPLYYRQPKDGETGPVTGYARISHQVYNKADDYYKFRDAINQLVRNKFTCALLSNLRVQGRGVGILQMNKGYNSAPCECWASYDGFGTMKFVISCRDSAARCRVSAVS 507
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele13g2193 507 MobiDBLite consensus disorder prediction 1 24 - -
Lele13g2193 507 SUPERFAMILY PLP-dependent transferases 47 444 IPR015424 -
Lele13g2193 507 Gene3D - 67 327 IPR015421 GO:0003824
Lele13g2193 507 PANTHER L-CYSTEINE DESULFHYDRASE 34 450 - -
Lele13g2193 507 Pfam Aminotransferase class-V 66 279 IPR000192 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele13g2193 Lele-ChrLele13 28425451 28428186 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele06g0065 06 421826 429067 Lele13g2193 13 28425451 28428186 CCT
Lele07g0262 07 1424064 1427029 Lele13g2193 13 28425451 28428186 CCT
Lele08g0068 08 400893 405071 Lele13g2193 13 28425451 28428186 CCT
Lele05g0246 05 1375156 1376544 Lele13g2193 13 28425451 28428186 CCT
Lele13g2193 13 28425451 28428186 Lele15g0219 15 1246577 1247956 hybridization
Lele13g2193 13 28425451 28428186 Lele16g0227 16 1254848 1256227 hybridization