Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g0065 ATGAGGTCCAATCATCTGTGGATAGCCTTCTGTTTATGGGCTTTAACATGCTCACTTCTTCCTTCTCTCTCTTCTGGGATTCTAAGAATTGGTTTGAAGAAGAGACCTCTTGACCTTCAAAGAATTCGGGCTGCAAGAGATGCAAGGGACGAACTGAGACCAGGAAGACCAGTGAAGGGTGCATATCATTATATTAGTAATTCACATGAAGAAGAAATACTACCTCTCAAAAATTATATGGACGCACAATATTTTGGAGAGATTGGAATAGGCACACCCCCGCAGACATTCACTATCATATTTGATACTGGTAGTTCCAACCTGTGGGTTCCATCATCATGGTGCTATTTTTCAATTGCCTGTTATGTCCATTCTTGGTACAAGGCTAGCAAATCCAGTACATACACTGAGAATGGAACATCATGTGAAATACAATATGGGTCTGGATCATTATCTGGTTTTTTCAGTCAAGATGACGTTAAAGTTGGTGATGTGGTCGTAAAGCATCAGGATTTCATTGAGGCTACTCGAGAGAAAAGCTTTTCCTTTGTACTCGCCAAGTTTGACGGGATACTTGGACTTGGGTTTCAGGAAATCTCAGTTGAGAAAGCAGTGCCAGTTTGGTACAATATGTTGGATCAAGATCTTGTTAGTGAGAAGGTGTTCTCTTTTTGGCTCAATGTGGATCCGGAGGCAGAAGAGGGTGGTGAAATTGTATTTGGAGGTGTTGATCCAAATCACTTCAAAGGAAAACATACTTATGTTCCAATTACTAGAAAAGGTTACTGGCAGATTGAAATGGGAGATTTTCTCATTGGAGGTCTTTCAACAGGTGTGTGCAAGGGTGGATGTGCTGCTATTGTGGATTCAGGAACATCTTTGCTTGCCGGTCCAACCTCGGTTGTGGCCGAAATCAACCATGCCATTGGAGCTGAAGGAGTTGTGAGTTCAGAATGTAAGGAAGTAGTTTCTCAATATGGAGAAAGGATATGGGATCTATTAGTATCAGGGGTGGAGCCTAATGAAGTGTGTTCACAACTTGGTTTATGCTCTGCATTTAGGGATCAATCTAAGAGCAACGGGATAAAAATGGTGACTGAAAGAATAGAAAGAGGGGGTATGTCAGCTAGAGATGATAGTATGTGCTCTCTGTGTGAGATGGCTGTCGTTTGGGTCCAGAATCAACTAAAACGGAAGGTAACCAAGGAAAAAGTGATCCACTACATAAATCAGTTATGTGAAAGACTGCCAAGCCCTGGTGGAGAATCCACAATAAGTTGTGATGGTATTTCTCAGATGCCAAACATCACAATTACAATCGGAGATAAACTTTTCAACCTCACTCCAGAGCAGTATATTCTGAAAACGGGAGAAGGAGATGCGGCAGTTTGCCTCAGTGGGTTCACAGCTTTTGATATTCCTCCTCCTCAGGGCCCTCTCTGGTATTATTACCTTGCATTCATGGTTCTTATAATATGCATGCGTCTTGGACATACAATAATGAACAACCTTGGATGATGTAGCTATTCAAATATCATGTATATAGGTTTCCAGGTTCTCTTCATTATGAGATCCAATAATCTGATGATAGCTTTCTGTTTATGGGCTTTAGCATGCTCACTTCTTCCTTCTTTCTCTTCTGGGATTCTAAGGATTGGTTTGAAGAAGAGAACTCTTGACCTTCAATGCCAAGAGCTGCAAGGGAAGAAATTGCCTGTTATGTCCATTCTTGGGACAAGGTTAGCAAATCCGGTACATACACTGAGAATGGTAACGTTAATGTGTTCATGCCAGTTTCTCATAATTGGTGTTACTCATTATGTTGGATGTAATTGTGGAAGCAGTAAGTTAGCATTTACTATGCAAGTATTCATGTTGACTTGCCAATCAGGAACATCATGTGCAATAAAATATGTATCTCGGTCAATATCTGGTTTTGATTTCATCGAGGTTACTCAGGAGACAACTCTTCCCTTTGCATTCCTTGAGTTTGATGGGATACTTGGACTTGGGTTTCAGGAGATATCAGTTGAGAAAGCAGTGCCAGTTTGGTACAATATGGTGGATCAAGATCTTGTTAGTGAGAAGGTGTTCTCTTTTTGGCTCAATGTGGATCCGGAGGCTGAAGCAGGTGGTGAAATAGTATTTGGAGGTGTTGAAATAGATCATTTCAAAGGAAAACATACTTGTGATCCAATTACTAGAAAATGTTTATGGCAGATTGAAATAGGAGATTTTCTCATCGGAGGTCTTTCAATAGGTAAAGGGAATATTTTAGTTTCCAACTATAAGAAACTTTTGTGTGGGGGATTTTACAGAGAAACCTTAAAGGGTTGTAATCATATGCCCATATATTATAATTCTGAAGGTGTTTGCAAGGGTGGATGCGCTGCTATTGTGGATTCAGGATCATCTTTGCTTACTGGTCCAACTTTACTTTGGGTGCCTTCGCGTTATTTGGCGGTTCAATTGTTAAGTGTGCCCAATTCCTCCTTCATTTCTTTTGCCTTTGGTCATGTAAAGCCAAGTCCTGCTGGAGAATCCACAGTAAGTCGTGAAGGTATTTCCCAGATGCCAAACATCACAATTACCATCGGAGATAAACTTTTCAACCTCACTTCAGAGCAGTTTTATGCCCTTTTTTCTGAATACAGGATCCTGGGCGATGTTTTTATGAGGGCATATCATACGGTGTTTGACTATGGCAATCTCCAAGTGGGTTTTGCTGAGGCTGCCTAG 2739 0.4093 MRSNHLWIAFCLWALTCSLLPSLSSGILRIGLKKRPLDLQRIRAARDARDELRPGRPVKGAYHYISNSHEEEILPLKNYMDAQYFGEIGIGTPPQTFTIIFDTGSSNLWVPSSWCYFSIACYVHSWYKASKSSTYTENGTSCEIQYGSGSLSGFFSQDDVKVGDVVVKHQDFIEATREKSFSFVLAKFDGILGLGFQEISVEKAVPVWYNMLDQDLVSEKVFSFWLNVDPEAEEGGEIVFGGVDPNHFKGKHTYVPITRKGYWQIEMGDFLIGGLSTGVCKGGCAAIVDSGTSLLAGPTSVVAEINHAIGAEGVVSSECKEVVSQYGERIWDLLVSGVEPNEVCSQLGLCSAFRDQSKSNGIKMVTERIERGGMSARDDSMCSLCEMAVVWVQNQLKRKVTKEKVIHYINQLCERLPSPGGESTISCDGISQMPNITITIGDKLFNLTPEQYILKTGEGDAAVCLSGFTAFDIPPPQGPLWYYYLAFMVLIICMRLGHTIMNNLGXCSYSNIMYIGFQVLFIMRSNNLMIAFCLWALACSLLPSFSSGILRIGLKKRTLDLQCQELQGKKLPVMSILGTRLANPVHTLRMVTLMCSCQFLIIGVTHYVGCNCGSSKLAFTMQVFMLTCQSGTSCAIKYVSRSISGFDFIEVTQETTLPFAFLEFDGILGLGFQEISVEKAVPVWYNMVDQDLVSEKVFSFWLNVDPEAEAGGEIVFGGVEIDHFKGKHTCDPITRKCLWQIEIGDFLIGGLSIGKGNILVSNYKKLLCGGFYRETLKGCNHMPIYYNSEGVCKGGCAAIVDSGSSLLTGPTLLWVPSRYLAVQLLSVPNSSFISFAFGHVKPSPAGESTVSREGISQMPNITITIGDKLFNLTSEQFYALFSEYRILGDVFMRAYHTVFDYGNLQVGFAEAA 912
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g0065 912 Pfam Eukaryotic aspartyl protease 83 481 IPR033121 -
Lele06g0065 912 ProSiteProfiles Saposin B type domain profile. 378 419 IPR008139 -
Lele06g0065 912 Pfam Saposin-like type B, region 2 318 350 IPR008138 -
Lele06g0065 912 FunFam Aspartic proteinase A1 314 417 - -
Lele06g0065 912 Gene3D Acid Proteases 641 912 IPR021109 -
Lele06g0065 912 PRINTS Pepsin (A1) aspartic protease family signature 286 297 IPR001461 GO:0004190|GO:0006508
Lele06g0065 912 PRINTS Pepsin (A1) aspartic protease family signature 236 249 IPR001461 GO:0004190|GO:0006508
Lele06g0065 912 PRINTS Pepsin (A1) aspartic protease family signature 90 110 IPR001461 GO:0004190|GO:0006508
Lele06g0065 912 SUPERFAMILY Acid proteases 8 482 IPR021109 -
Lele06g0065 912 Gene3D Acid Proteases 28 242 IPR021109 -
Lele06g0065 912 Gene3D - 314 417 - -
Lele06g0065 912 FunFam Lysosomal aspartic protease 626 758 - -
Lele06g0065 912 Pfam Saposin-like type B, region 1 381 417 IPR007856 GO:0006629
Lele06g0065 912 ProSiteProfiles Peptidase family A1 domain profile. 575 909 IPR033121 -
Lele06g0065 912 SUPERFAMILY Acid proteases 631 911 IPR021109 -
Lele06g0065 912 SUPERFAMILY Saposin 315 417 IPR011001 -
Lele06g0065 912 SMART sapb_4 278 350 IPR008139 -
Lele06g0065 912 ProSiteProfiles Peptidase family A1 domain profile. 84 507 IPR033121 -
Lele06g0065 912 FunFam Lysosomal aspartic protease 70 312 - -
Lele06g0065 912 ProSitePatterns Eukaryotic and viral aspartyl proteases active site. 798 809 IPR001969 GO:0004190|GO:0006508
Lele06g0065 912 ProSitePatterns Eukaryotic and viral aspartyl proteases active site. 99 110 IPR001969 GO:0004190|GO:0006508
Lele06g0065 912 PANTHER BETA-SITE APP-CLEAVING ENZYME, ISOFORM A-RELATED 20 488 IPR001461 GO:0004190|GO:0006508
Lele06g0065 912 ProSitePatterns Eukaryotic and viral aspartyl proteases active site. 286 297 IPR001969 GO:0004190|GO:0006508
Lele06g0065 912 Pfam Eukaryotic aspartyl protease 642 753 IPR033121 -
Lele06g0065 912 Pfam Eukaryotic aspartyl protease 788 911 IPR033121 -
Lele06g0065 912 Gene3D Acid Proteases 243 487 IPR021109 -
Lele06g0065 912 ProSiteProfiles Saposin B type domain profile. 314 354 IPR008139 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g0065 Lele-ChrLele06 421826 429067 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele06g0065 06 421826 429067 Lele13g2193 13 28425451 28428186 CCT
Lele06g0065 06 421826 429067 Lele14g2131 14 26803794 26807154 CCT
Lele06g0065 06 421826 429067 Lele15g0219 15 1246577 1247956 CCT
Lele06g0065 06 421826 429067 Lele16g0227 16 1254848 1256227 CCT
Lele05g0249 05 1383432 1395055 Lele06g0065 06 421826 429067 ECH
Lele06g0065 06 421826 429067 Lele06g0065 06 421826 429067 ECH
Lele06g0065 06 421826 429067 Lele07g0262 07 1424064 1427029 hybridization
Lele06g0065 06 421826 429067 Lele08g0068 08 400893 405071 hybridization