Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele09g0818 ATGAACACAGCAAGATTTATCAAGTGTGTCACAGTTGGTGATGGAGCTGTCGGAAAAACCTGCATGCTGATTTCCTACACCAGCAACACTTTCCCTACGGACTATGTACCAACAGTTTTTGACAACTTCAGTGCAAATGTGGTTGTTGATGGAAGCACAGTTAACCTTGGATTATGGGACACTGCTGGGCAGGAGGATTATAACAGGCTTAGGCCTTTGAGCTATAGAGGAGCAGATGTGTTTTTGCTTGCCTTCTCTCTCATAAGCAGAGCCAGCTATGAGAACATCTCTAAAAAGTGGATTCCTGAACTGAGACATTATGCCCCAAATGTGCCAGTTATACTTGTGGGAACCAAGCTCGATTTGCGTCAAGACAGGCAGTATTTTATAGATCATCCTGGTGCTAAGCCTATAACTACCGCCCAGGCAAAACTGAAGAAGGACATCGGTGCTGCTTCATACGTAGAGTGCAGCGCAAAAACTCAGCAGAATGTGAAGGCAGTGTTTGATGCTGCAATCAAGGTCGTCTTACAGCCACCTAAGGCAAGGAAAAGGCGAAAGAAGACCAGACCCTATGCGGAACCTCATGGACGCTCACAATCTGGACGATCGGGATTTGTTATTTGGTCTGATATGATAATGCATAGCAACCTCTTCAACCCAAGGATATCGTGGAGAAGGGTCTTCGTCTCGCCGGATTATAACCAGTTCATGGAACGGCAAATAGAGTTGACTATGAGGCGCATTAAGTATCTATTGGATCGTCGGGTCTTCCAAGGTTGGCTTACCGGTACGGGTCCTGAGTTCGAATTGAGGATATTTGCTCTCCATGAGGTTCTTGGGATGTATGATCATTCCATCAACGTTAAGCTCGGTGCCCATTTGTTCTTGTGGGGTGGAGCCATACGGTTGCTTGGAACCAGGCACCATCAGGACAAGTGGTTGAGAGCCCCTGAAAATTACAAGATCGAGGGTTGTTTTGCTATGACTGAGCTCGGCTATGGAAGTATTGCATCACTGGAGAGTTTGTCATTAAAACTCCATGTGAATCAGCTCAAAAGTATTGGATTGGGGGTTGATGTGTATGCAACACATGCCATCGTCTTTTCGCAACTCAACATTAATGGAAGCAATCAAGGTGTTCATGCATTTATTGTTCAAATCAGGGACTCAAATGGAAACACATGTCCAAACATCAGAATAGCTGATTGTGGTTATGAAATTGGTTTAAATGGAATTGATAACGGTCGTATATGGTTTGACAACGTGCGAATACCCAGAGAAGATATGTTGAATTCTGTGGCTGATGTTTCACCAAATGGTCAATATTCGAGTAATGTACTTTGTGCATCTGATCATGTTCCTACCAATCTTCAACATCTTAGCCATTTGAAGGGTGAGTATGATGTGCAGTCAACTTTTGATGGGGACAACCATGTTCTCTTGCAGCAGGTATGTTGCAGTATACCGTTGAGTGAGCAAAGCACTTTTGCAGAATACATAGCAAATAAGAAAAGCATGCCATTTGCAGGTTTGGGATTAGAATACATGAACAAACCTCAGCCTGTTATCCCATCTCTGCTAACAAGTTCTACCATCAGGAACAACCGGTCTCAGATTGACATATTCCGTATAAGAGAGCGAGATCTCTTGAGTCGTTTTGCTGCAGAGGTATCAGAATATCAAACTCAGGGAGAAAGTGCAGAATCTGCCTTAATTCCGAGTTTTCTGCTTGCTGAGGACTTGGGTAAAGCTTTCTCAGAACGATCAGTATTGCAAACCTTCATGGATGCTGAATCTTCTTTATCAACGGGTTCCTGGAAGAATATCTTGGGGCTTTTGAGATCCATGTATGCTTTGATTTACATGGATGAAGATGCTTCATTCCTCATATATGGATACTTGTCAAGAGATGAAGCTATTGCAGTGAGGAAAGAAGTGACAAAACTCGCTTCTGAATTTCGATCCCATGCCCTAGCCCAGAATGACAGTTATGGGCATGATGGCATATTTTCGGATTTTCCGATAAAGTCTAATCAGAAATGGCACACCAAACGCAAGCGCTCCGGTTCTTCACCGCCTTCTTATGAAGTCCCATTTTTTAGATTATGTTAA 2115 0.434 MNTARFIKCVTVGDGAVGKTCMLISYTSNTFPTDYVPTVFDNFSANVVVDGSTVNLGLWDTAGQEDYNRLRPLSYRGADVFLLAFSLISRASYENISKKWIPELRHYAPNVPVILVGTKLDLRQDRQYFIDHPGAKPITTAQAKLKKDIGAASYVECSAKTQQNVKAVFDAAIKVVLQPPKARKRRKKTRPYAEPHGRSQSGRSGFVIWSDMIMHSNLFNPRISWRRVFVSPDYNQFMERQIELTMRRIKYLLDRRVFQGWLTGTGPEFELRIFALHEVLGMYDHSINVKLGAHLFLWGGAIRLLGTRHHQDKWLRAPENYKIEGCFAMTELGYGSIASLESLSLKLHVNQLKSIGLGVDVYATHAIVFSQLNINGSNQGVHAFIVQIRDSNGNTCPNIRIADCGYEIGLNGIDNGRIWFDNVRIPREDMLNSVADVSPNGQYSSNVLCASDHVPTNLQHLSHLKGEYDVQSTFDGDNHVLLQQVCCSIPLSEQSTFAEYIANKKSMPFAGLGLEYMNKPQPVIPSLLTSSTIRNNRSQIDIFRIRERDLLSRFAAEVSEYQTQGESAESALIPSFLLAEDLGKAFSERSVLQTFMDAESSLSTGSWKNILGLLRSMYALIYMDEDASFLIYGYLSRDEAIAVRKEVTKLASEFRSHALAQNDSYGHDGIFSDFPIKSNQKWHTKRKRSGSSPPSYEVPFFRLC 704
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele09g0818 704 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 6 177 IPR027417 -
Lele09g0818 704 SMART ran_sub_2 12 212 - -
Lele09g0818 704 PANTHER ELECTRON TRANSPORT OXIDOREDUCTASE 211 336 IPR012258 GO:0003997|GO:0005777|GO:0006631|GO:0071949
Lele09g0818 704 SMART rho_sub_3 9 179 IPR001806 GO:0003924|GO:0005525
Lele09g0818 704 Pfam Ras family 8 177 IPR001806 GO:0003924|GO:0005525
Lele09g0818 704 SUPERFAMILY Acyl-CoA dehydrogenase NM domain-like 235 437 IPR009100 GO:0016627
Lele09g0818 704 Pfam Acyl-CoA oxidase 537 666 IPR002655 GO:0003997|GO:0005777|GO:0006635
Lele09g0818 704 SMART rab_sub_5 7 179 - -
Lele09g0818 704 ProSiteProfiles small GTPase Ras family profile. 2 214 IPR001806 GO:0003924|GO:0005525
Lele09g0818 704 Gene3D - 537 665 - -
Lele09g0818 704 ProSiteProfiles small GTPase Rab1 family profile. 1 224 - -
Lele09g0818 704 CDD Rop_like 6 177 - -
Lele09g0818 704 FunFam rac-like GTP-binding protein RAC2 5 192 - -
Lele09g0818 704 FunFam Acyl-coenzyme A oxidase 537 665 - -
Lele09g0818 704 Gene3D - 325 446 IPR046373 GO:0016627
Lele09g0818 704 ProSiteProfiles small GTPase Rho family profile. 1 176 - -
Lele09g0818 704 PRINTS Transforming protein P21 ras signature 47 69 - -
Lele09g0818 704 PRINTS Transforming protein P21 ras signature 154 176 - -
Lele09g0818 704 PRINTS Transforming protein P21 ras signature 7 28 - -
Lele09g0818 704 PRINTS Transforming protein P21 ras signature 109 122 - -
Lele09g0818 704 PRINTS Transforming protein P21 ras signature 30 46 - -
Lele09g0818 704 SUPERFAMILY Acyl-CoA dehydrogenase C-terminal domain-like 534 666 IPR036250 GO:0016627
Lele09g0818 704 SMART ras_sub_4 4 179 - -
Lele09g0818 704 MobiDBLite consensus disorder prediction 182 201 - -
Lele09g0818 704 Gene3D - 5 190 IPR027417 -
Lele09g0818 704 TIGRFAM small_GTP: small GTP-binding protein domain 7 170 IPR005225 GO:0005525
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele09g0818 Lele-ChrLele09 6499623 6511688 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele09g0818 461 666 Acyl Lipid Metabolism Gene Families AT1G06290 55.072 2.17e-65 227
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele09g0818 09 6499623 6511688 Lele29g0595 29 3651673 3652316 CCT
Lele09g0818 09 6499623 6511688 Lele30g0813 30 12314654 12315680 CCT
Lele09g0818 09 6499623 6511688 Lele31g0946 31 16755021 16755962 CCT
Lele09g0818 09 6499623 6511688 Lele32g0576 32 3582842 3583532 CCT
Lele09g0818 09 6499623 6511688 Lele09g0818 09 6499623 6511688 ECH
Lele09g0818 09 6499623 6511688 Lele11g0822 11 8310488 8313579 hybridization
Lele09g0818 09 6499623 6511688 Lele12g0524 12 13523996 13525664 hybridization