Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele29g0595 ATGAATAACGTCATGAGGGAACAAGATGACGAAAGGAAGGGCCGCCTAATATGCCACAAGTTGGAGAAATATTTGCATATGCAGCAAGCAATTCCTTGCCGGTCGTCATGGAGACCTCTTCTTCCTCACCATTCTCATTTCAGTCACAGTCTGAACAACACCACAGCATCCTCCTCTGTTTCTGTGCTTGACGGAGGAATTTCGGAGGGAATGGTGAAGAACATGGTGTTAGAGAACGCGGTGATAGTTTTCGCGAGGCGTGGATGCTGTATGAGCCACGTTGTGAAGCGATTGCTTCTTGTTTTGGGCGTGAATCCGGCGGTGTATGAGGTTGATGAGGGAGATGAAGTGGGTGTTGTTACAGAGTTGGAAGCCATTATTGGTGATCGGAAACAGGGGAAGGTGCAGTTCCCGGCGGTGTTTATTGGCGGCAAGTTGTTCGGTGGGTTGGATCGACTCATGGCCACTCATATCTCTGGTGAATTGGTTCCGATCTTGAAGGACGCCGGAGCTTTGTGA 519 0.4952 MNNVMREQDDERKGRLICHKLEKYLHMQQAIPCRSSWRPLLPHHSHFSHSLNNTTASSSVSVLDGGISEGMVKNMVLENAVIVFARRGCCMSHVVKRLLLVLGVNPAVYEVDEGDEVGVVTELEAIIGDRKQGKVQFPAVFIGGKLFGGLDRLMATHISGELVPILKDAGAL 172
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele29g0595 172 ProSiteProfiles Glutaredoxin domain profile. 69 172 - -
Lele29g0595 172 CDD GRX_GRXh_1_2_like 80 165 - -
Lele29g0595 172 PANTHER GLUTAREDOXIN 72 172 IPR011905 -
Lele29g0595 172 Pfam Glutaredoxin 81 146 IPR002109 -
Lele29g0595 172 SUPERFAMILY Thioredoxin-like 71 171 IPR036249 -
Lele29g0595 172 TIGRFAM GlrX-like_plant: glutaredoxin-like family 72 172 IPR011905 -
Lele29g0595 172 Gene3D Glutaredoxin 68 172 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele29g0595 Lele-ChrLele29 3651673 3652316 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele29g0595 72 172 Miscellaneous Gene Families AT4G15690 41.584 1.29e-23 87.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele09g0818 09 6499623 6511688 Lele29g0595 29 3651673 3652316 CCT
Lele10g0745 10 5742238 5743938 Lele29g0595 29 3651673 3652316 CCT
Lele29g0595 29 3651673 3652316 Lele31g0946 31 16755021 16755962 hybridization
Lele29g0595 29 3651673 3652316 Lele32g0576 32 3582842 3583532 hybridization