Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele31g0946 ATGACAATATTTACATTACTAAAAGAGCAGAAGAAAAACAGGAGGGACTCAAGAAGAGAGGATCCAGATCCGGCGAATTCGGGCCGGAACCCGCATGCAGAGACGATAGAGCATGGCGCAACTATGCAGCAAGCAATTCCTTGCCGGTCGTCATGGAGACCTCTTCTTCCCCATCATTCTCATTTCAGTCACAGTCTGAACAACACCACAGCATCCTCCTCTGTTTCTGTGCTTGCTGGAGGAATTTCGGAGGGAATGGTGAAGAACATGGTGTTAGAGAACGCGGTGATAGTTTTCGCGAGGCGTGGATGCTGTATGAGCCACGTTGTGAAGCGATTGCTTCTTGGTTTGGGCGTGAATCCGGCGGTGTATGAGGTTGATGAGGGAGATGAAGTGGGTGTTGTTACAGAGTTGGAAGCCATTATTGGTGATCGGAAACAGGGGAAGGTGCAGTTCCCGGAGGTGTTTATTGGCAGCAAGTTGTTCGGAGGGTTGGATCGACTCATGGCCACTCATATCTCTGGTGAATTGGTTCCGATCTTGAAGGACGCCGGCGCTTTGTGGCTCTGA 570 0.5035 MTIFTLLKEQKKNRRDSRREDPDPANSGRNPHAETIEHGATMQQAIPCRSSWRPLLPHHSHFSHSLNNTTASSSVSVLAGGISEGMVKNMVLENAVIVFARRGCCMSHVVKRLLLGLGVNPAVYEVDEGDEVGVVTELEAIIGDRKQGKVQFPEVFIGSKLFGGLDRLMATHISGELVPILKDAGALWL 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele31g0946 189 MobiDBLite consensus disorder prediction 1 35 - -
Lele31g0946 189 Pfam Glutaredoxin 96 161 IPR002109 -
Lele31g0946 189 Gene3D Glutaredoxin 83 188 - -
Lele31g0946 189 MobiDBLite consensus disorder prediction 8 27 - -
Lele31g0946 189 CDD GRX_GRXh_1_2_like 95 180 - -
Lele31g0946 189 ProSiteProfiles Glutaredoxin domain profile. 84 188 - -
Lele31g0946 189 PANTHER GLUTAREDOXIN 87 189 IPR011905 -
Lele31g0946 189 TIGRFAM GlrX-like_plant: glutaredoxin-like family 87 189 IPR011905 -
Lele31g0946 189 SUPERFAMILY Thioredoxin-like 86 188 IPR036249 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele31g0946 Lele-ChrLele31 16755021 16755962 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele31g0946 87 189 Miscellaneous Gene Families AT4G15690 41.748 1.05e-24 91.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele09g0818 09 6499623 6511688 Lele31g0946 31 16755021 16755962 CCT
Lele10g0745 10 5742238 5743938 Lele31g0946 31 16755021 16755962 CCT
Lele29g0595 29 3651673 3652316 Lele31g0946 31 16755021 16755962 hybridization
Lele30g0813 30 12314654 12315680 Lele31g0946 31 16755021 16755962 hybridization