Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele30g0813 ATGCCATTAATCTACGTGGCTAAAAAACAGAAGAATAACAGGAGGGAGGCAGGAGGGGACTCTGCAAGAGAGGATCCAGATCCCGGGTATGCAGAGAACAGAGCCTGGCGCAAAATGAAAGACGTCATGAGGAAACAAGATGACGAAAGCAAGGGCCGCGTAATATGTCACAAGTTGGAGAAATATTTGCATATGCAACAAGCAATTCCTTGCCGGTCGTCATGGCGACCTCTTCTTCCTCACCATTCTCATTTCCGCAACAATCTGAACAACAAGTCAGCATCCTCCTCTGTTTCTGTGCTTGCTGGAGGGAGTTTGGAGGGAATGGTGAAGAACATGGTTTCAGAGAACGCGGTGATAGTGTTTGCGAGGCGTGGATGCTGTATGAGCCATGTCGTGAAGCGATTGCTTCTTGGTTTGGGTGTGAATCCGGCGGTGTATGAGGTGGATGAGGGAGATGAAGTGGGTGTTGTTACAGAGTTGGAAGCGATTATAGGTGATCGGAAACAGGGGAATGTTCAATTCCCGGCGGTCTTTATCGGCGGCAAGTTGTTCGGAGGGTTAGATCGACTCATGGCCACTCATATCTCTGGTGAATTGGTTCCGATCTTGAAGGATGCCGGCGCTTTGTGGCTCTGA 639 0.4945 MPLIYVAKKQKNNRREAGGDSAREDPDPGYAENRAWRKMKDVMRKQDDESKGRVICHKLEKYLHMQQAIPCRSSWRPLLPHHSHFRNNLNNKSASSSVSVLAGGSLEGMVKNMVSENAVIVFARRGCCMSHVVKRLLLGLGVNPAVYEVDEGDEVGVVTELEAIIGDRKQGNVQFPAVFIGGKLFGGLDRLMATHISGELVPILKDAGALWL 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele30g0813 212 TIGRFAM GlrX-like_plant: glutaredoxin-like family 110 212 IPR011905 -
Lele30g0813 212 MobiDBLite consensus disorder prediction 1 33 - -
Lele30g0813 212 Gene3D Glutaredoxin 104 211 - -
Lele30g0813 212 Pfam Glutaredoxin 119 184 IPR002109 -
Lele30g0813 212 MobiDBLite consensus disorder prediction 9 33 - -
Lele30g0813 212 PANTHER GLUTAREDOXIN 110 212 IPR011905 -
Lele30g0813 212 SUPERFAMILY Thioredoxin-like 108 211 IPR036249 -
Lele30g0813 212 CDD GRX_GRXh_1_2_like 118 203 - -
Lele30g0813 212 ProSiteProfiles Glutaredoxin domain profile. 107 211 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele30g0813 Lele-ChrLele30 12314654 12315680 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele30g0813 110 212 Miscellaneous Gene Families AT4G15700 44.660 8.74e-27 97.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele09g0818 09 6499623 6511688 Lele30g0813 30 12314654 12315680 CCT
Lele10g0745 10 5742238 5743938 Lele30g0813 30 12314654 12315680 CCT
Lele30g0813 30 12314654 12315680 Lele31g0946 31 16755021 16755962 hybridization
Lele30g0813 30 12314654 12315680 Lele32g0576 32 3582842 3583532 hybridization