Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lele05g0671 | ATGGCCAAGGTTGTGAATCAGACTGGTTTGATTTCAAATTGGCGTGACGATTTGCAACAACATCTCCGCAAAATTTCTCCACGTCCAAAGATTCTTAGTTATGATTCTGGTGTTTCTTTCCTTGTGAAAAGGTTTCCTTCTCTCAAACTAAAATCCCAGGTTCTCAGATCTTCATCCTCTTCTTCTTCTGAACTCTATGGCACAAACCTGGTGTTTCACGACTATGCTCGCATGCCCGGCAGAGCGAAATCTCTTTCTCGATCTTCGTTGCCCGCTCAGATGGCCCTTGGAATTGGTAAAGCTCAGAAATGGTGGGAAACAGGGCTTCAGCCAAATATGAGGGAGGTGACTTCGGCACACGACCTTGTGGACTCCCTATTAAACGCAGGGGCCAAGCTGGTGGTGGTTGATTTCTTTTCTCCTGGTTGTGGTGGTTGCAGAGCTCTCCATCCTAAGATATGTCAACTGGCAGAAATGAATCCAGATGTTCAATTTCTTCAAGTGAATTATGAGGAGCACAAATCTATGTGTTATAGTCTTAACGTGCATGTCCTTCCCTTCTTCCGCTTCTACAGAGGCGCCCATGGTCGTTTATGCAGCTTTAGCTGTACCAATTCCACGATTAAGAAGTTCAAAGATGCATTGGCGAAACACACCCCGGACAGATGCAGCTTGGGCCCAACCAAAGGGTTGGAGGAGAAAGAGCTCTTAGCTCTGTCTGCCAACAAGGATCTGTCATTTACTTACACACCAAAACCAAATGAAGTCACGCATGAAGCCCCTGCACAGCCTGCTCCTCCTAGTCCCGAGCCCCTTCCATTAGCTTCAGGGAGCCCCAAGTCTTGTGAAGTGGAAAAGGAGAGAAGTGTGAGCACTGCTGGGCGTTGA | 888 | 0.4741 | MAKVVNQTGLISNWRDDLQQHLRKISPRPKILSYDSGVSFLVKRFPSLKLKSQVLRSSSSSSSELYGTNLVFHDYARMPGRAKSLSRSSLPAQMALGIGKAQKWWETGLQPNMREVTSAHDLVDSLLNAGAKLVVVDFFSPGCGGCRALHPKICQLAEMNPDVQFLQVNYEEHKSMCYSLNVHVLPFFRFYRGAHGRLCSFSCTNSTIKKFKDALAKHTPDRCSLGPTKGLEEKELLALSANKDLSFTYTPKPNEVTHEAPAQPAPPSPEPLPLASGSPKSCEVEKERSVSTAGR | 295 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lele05g0671 | 295 | MobiDBLite | consensus disorder prediction | 249 | 295 | - | - | |
| Lele05g0671 | 295 | Gene3D | Glutaredoxin | 102 | 219 | - | - | |
| Lele05g0671 | 295 | CDD | TRX_family | 129 | 193 | - | - | |
| Lele05g0671 | 295 | MobiDBLite | consensus disorder prediction | 281 | 295 | - | - | |
| Lele05g0671 | 295 | FunFam | Thioredoxin-like 1-2, chloroplastic | 102 | 220 | - | - | |
| Lele05g0671 | 295 | SUPERFAMILY | Thioredoxin-like | 102 | 218 | IPR036249 | - | |
| Lele05g0671 | 295 | PANTHER | THIOREDOXIN, MITOCHONDRIAL | 77 | 251 | - | - | |
| Lele05g0671 | 295 | MobiDBLite | consensus disorder prediction | 260 | 274 | - | - | |
| Lele05g0671 | 295 | Pfam | Thioredoxin | 124 | 195 | IPR013766 | - | |
| Lele05g0671 | 295 | ProSiteProfiles | Thioredoxin domain profile. | 84 | 220 | IPR013766 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Lele05g0671 | Lele-ChrLele05 | 3951691 | 3953348 | Dispersed/Wgd |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Lele05g0671 | 05 | 3951691 | 3953348 | Lele05g0671 | 05 | 3951691 | 3953348 | ECH | |
| Lele05g0671 | 05 | 3951691 | 3953348 | Lele07g0706 | 07 | 4000122 | 4001799 | hybridization | |
| Lele05g0671 | 05 | 3951691 | 3953348 | Lele08g0504 | 08 | 3065839 | 3067562 | hybridization |