Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele07g1596 ATGGTGACGAAGGGTGGAGGGTGCGGCGGAGCAGGAGGCAAGGGAGCGAAGAGAGGAAGAACTGCCGCCGAAGAAGAGCAAAACCAGCTGTCGCTCGTCGCACTCCTCTTGGCCGCTTTGAGGAAGTCCATGGTGTCTTGTCGGGTGGATCGACCCGACGAGGTTATCCCCTCCGTTCATCACATGGAAATCGGATGGCCCACCAACGTTCAACACATCACTCATGTAACTTTCGATCGCTTCAATGGTTTTCTGGGTCTTCCCGTTGAGTTCGAGATCGAGATCCCGGGTCGGGTTCCCAGTGCCAGTATAAGTGTGTTTGGCGTGTCAGCGGAATCTATGCAGTGTTCTTATGATTCAAAAGGAAATAGTGTGCCCACTATTCTCTTACTCATGCAGGAGCGTTTATACTCACAGGGAGGCCTAAAGCGGGAAGGAATATTTCGCATAAACCCAGAAAACAGTCATGAAGAACATGTAAGAGACCGGTTGAATAGGGGAATTGTGCCGGGTGACATTGATGTGCACTGTTTGGCGGGCTTAATTAAAGCCTGGTTTCGAGAGCTTCCTTCAGGAGTACTCGATGGACTTTCCCCGGAACAAGTTCTTCAGTGCAACACAGAAGAAGAATCTGTTGAGCTCGTGAAGCAGCTAAAACCAACAGAGGCTGCCTTGCTCAACTGGGCTATTGATCTCATGGCTGATGTTGTAGAGGAGGAAGAATTCAACAAAATGAATTCAAGAAATATCGCAATGGTCTTTGCTCCAAACATGACTCAGATGTCTGATCCATTAACTGCTCTGATGCACGCGGTCCAAGTGATGAACTTGCTGAAAACCTTGATAATGAAAACACTTAGAGAACGTGAAGAAACAACGACGGGTGGATATTCACCCGTGTCATTTCGTTCATCGGATCGCCAGTCTGAGGAGGGGTATGACAGTCAGCAAGAAATGGAGGCCAGTGGTGAATTAAGAAGAACCAAGTCAGATTATGATGAACATGCACACTACAGCCACAGCAGCAGCGAAGAAGAAGAAGGTGGCGCCGAATCTTTGAGTGACGTAGAAGAATGCTTCTTGAAGCAGTTGGATGAGCACACAAAGGAACACTTGGAAGAACCTGCAGGAGATTTGCAGGAAGACCGTGTTAGCCCCATAAGTCGCTCTGGCAGTAACATGGAAACTGCTATGTCATTTACTGATAGCAAAACTGAGAATTCTTGCTTGAGTTGCTCGCATTGTGAGAAATCGATGACAGATCAGACTGTTGGGGGATCTAAAGTTGAGACGAGTAGTCCATCACTAGGATGTACAGGCAGCAATGATATGGAGATGATGGTTAAATTTACAGGTTCTGTAGTGCCAATGTTTACCTCTAATTAG 1386 0.4733 MVTKGGGCGGAGGKGAKRGRTAAEEEQNQLSLVALLLAALRKSMVSCRVDRPDEVIPSVHHMEIGWPTNVQHITHVTFDRFNGFLGLPVEFEIEIPGRVPSASISVFGVSAESMQCSYDSKGNSVPTILLLMQERLYSQGGLKREGIFRINPENSHEEHVRDRLNRGIVPGDIDVHCLAGLIKAWFRELPSGVLDGLSPEQVLQCNTEEESVELVKQLKPTEAALLNWAIDLMADVVEEEEFNKMNSRNIAMVFAPNMTQMSDPLTALMHAVQVMNLLKTLIMKTLREREETTTGGYSPVSFRSSDRQSEEGYDSQQEMEASGELRRTKSDYDEHAHYSHSSSEEEEGGAESLSDVEECFLKQLDEHTKEHLEEPAGDLQEDRVSPISRSGSNMETAMSFTDSKTENSCLSCSHCEKSMTDQTVGGSKVETSSPSLGCTGSNDMEMMVKFTGSVVPMFTSN 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele07g1596 461 Gene3D CRIB domain 58 95 IPR036936 -
Lele07g1596 461 MobiDBLite consensus disorder prediction 1 22 - -
Lele07g1596 461 Pfam RhoGAP domain 126 260 IPR000198 GO:0007165
Lele07g1596 461 ProSiteProfiles CRIB domain profile. 64 77 IPR000095 -
Lele07g1596 461 SMART PBD_5 64 98 IPR000095 -
Lele07g1596 461 MobiDBLite consensus disorder prediction 292 306 - -
Lele07g1596 461 FunFam Rho GTPase-activating protein 5 94 287 - -
Lele07g1596 461 Gene3D Rho GTPase activation protein 96 290 IPR008936 -
Lele07g1596 461 SMART RhoGAP_3 123 286 IPR000198 GO:0007165
Lele07g1596 461 SUPERFAMILY GTPase activation domain, GAP 105 283 IPR008936 -
Lele07g1596 461 MobiDBLite consensus disorder prediction 290 354 - -
Lele07g1596 461 MobiDBLite consensus disorder prediction 307 347 - -
Lele07g1596 461 PANTHER MKIAA1688 PROTEIN 23 418 IPR044785 GO:0005096
Lele07g1596 461 MobiDBLite consensus disorder prediction 373 394 - -
Lele07g1596 461 CDD RhoGAP 126 282 - -
Lele07g1596 461 Pfam P21-Rho-binding domain 63 90 IPR000095 -
Lele07g1596 461 ProSiteProfiles Rho GTPase-activating proteins domain profile. 109 290 IPR000198 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele07g1596 Lele-ChrLele07 9877797 9880097 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele13g2038 13 27564466 27567538 Lele07g1596 07 9877797 9880097 CCT
Lele14g1970 14 25904236 25907211 Lele07g1596 07 9877797 9880097 CCT
Lele15g0368 15 2104599 2107507 Lele07g1596 07 9877797 9880097 CCT
Lele16g0389 16 2122707 2125779 Lele07g1596 07 9877797 9880097 CCT
Lele07g1596 07 9877797 9880097 Lele07g1596 07 9877797 9880097 ECH
Lele05g1539 05 9874483 9876797 Lele07g1596 07 9877797 9880097 hybridization
Lele06g1388 06 8936451 8938770 Lele07g1596 07 9877797 9880097 hybridization