Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele07g0604 ATGACTTCTCTCCTAGGACCGTTTCCTCCCTTCCCTTTCGCGGCCTTGCTTCATGCGAGCAAGACGAGGGCTATAGAGAACAGGGGAAGTGGTAATTCCTCAGTTCAAGAACCTCAGGATGCAGATTATGATATTATGCGGTCTCTGAGCGACGAGCTAGAGACACTGATATTGGCCAGACTTCCAAGATCTGAGCATTGGAAACTATGCTTTCTGAACAAGAGGCTTCAAGCCCTTGTGAAGACTGGTGAAATCATCAAAATCAGGAGAGAAATAGGGTTCAAAGAGCCCACTGTGTTCATGTTAGCAAGTGGAGAGACCAATTGGTGGGCCCTCGATGAACACTTCGAATTCTTCAGAACGCTCCCTTTTATCCCATCAGACTACAATTTCACACACGGAGATAAGGAATCATTCTGTGCAGGTTCCCATTTGTTTGTTTCAGGCAGGGAATTCGATGGGGCTGCTATTTGGAAGTACGAGGTAGCAACAAACCAATGGTTAAAGGCTCCCTCCATGAACAAGCCTAGGTGTCTGTTCGCATCAGCCAGCTCTGGTAACTATGCTTTCGTCGCAGGGGGTCAAGACGCCAAAACTTATTCACAGGTCTTGGACTCTGCTGAGAAATACAATTCAAAGAGCAAGTGTTGGGAATCTCTGCCTAGGATGAATCGGAATAGAAAGTCTTGCTCGGGTTGTTACATGGACAATAAATTCTATGTAATTGGGGGACAGGATGAGCAACAAAACATCCTTACTTGTGGGGAATTCTTTGACGAGGAAGCCAACACATGGAACTTAATTCCCGACATGTTGAAAGACATTCCTGTGTCGGCTTCACGGTCCCCACCACTTGTTGCTGTCGCCAATAATCAGCTTTACGCGCTTGACGCCTCCTCCAACGAGCTGAAAACGTATCTGAAGCGAAGCAACTCATGGAAGAAGCTAGGAACAGTTCCGGTGGTGGCCAGTGCTCAAGGAGGTTGGGGCGTGGCGTTCAAGTCACTGGGGAATGAGCTGCTCGTAATCGGTGCCACTGCTACGCCTTCTTGTAGGCGTGGCCTCACGATCTACACTTGTTGCCCTGATCCTTCCGTTGAGGGGCTTCAATGGCAGCGAATTGAATGTGGCAACATGAAGCTTAGTCCCTTCATTCACAATTGTGCTGTGAGGGTAGCTTGA 1182 0.4822 MTSLLGPFPPFPFAALLHASKTRAIENRGSGNSSVQEPQDADYDIMRSLSDELETLILARLPRSEHWKLCFLNKRLQALVKTGEIIKIRREIGFKEPTVFMLASGETNWWALDEHFEFFRTLPFIPSDYNFTHGDKESFCAGSHLFVSGREFDGAAIWKYEVATNQWLKAPSMNKPRCLFASASSGNYAFVAGGQDAKTYSQVLDSAEKYNSKSKCWESLPRMNRNRKSCSGCYMDNKFYVIGGQDEQQNILTCGEFFDEEANTWNLIPDMLKDIPVSASRSPPLVAVANNQLYALDASSNELKTYLKRSNSWKKLGTVPVVASAQGGWGVAFKSLGNELLVIGATATPSCRRGLTIYTCCPDPSVEGLQWQRIECGNMKLSPFIHNCAVRVA 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele07g0604 393 SMART kelc_smart 144 187 IPR006652 GO:0005515
Lele07g0604 393 SMART kelc_smart 238 291 IPR006652 GO:0005515
Lele07g0604 393 SMART kelc_smart 188 237 IPR006652 GO:0005515
Lele07g0604 393 Pfam Kelch motif 227 271 IPR006652 GO:0005515
Lele07g0604 393 Pfam Kelch motif 176 224 IPR006652 GO:0005515
Lele07g0604 393 Gene3D - 100 375 IPR015915 GO:0005515
Lele07g0604 393 FunFam F-box/kelch-repeat protein SKIP11 91 376 - -
Lele07g0604 393 PANTHER GALACTOSE OXIDASE/KELCH REPEAT PROTEIN-RELATED 42 390 - -
Lele07g0604 393 SUPERFAMILY Kelch motif 106 363 IPR015915 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele07g0604 Lele-ChrLele07 3457193 3459047 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele07g0604 07 3457193 3459047 Lele13g1235 13 22665596 22666739 CCT
Lele07g0604 07 3457193 3459047 Lele14g1133 14 21003203 21004323 CCT
Lele07g0604 07 3457193 3459047 Lele15g1223 15 7090721 7091864 CCT
Lele07g0604 07 3457193 3459047 Lele16g1255 16 7101490 7102661 CCT
Lele07g0604 07 3457193 3459047 Lele07g0604 07 3457193 3459047 ECH
Lele05g0577 05 3391939 3393954 Lele07g0604 07 3457193 3459047 hybridization
Lele06g0398 06 2442468 2443643 Lele07g0604 07 3457193 3459047 hybridization