Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g0577 ATGCCTCAATTGGTAGCCCCTGATAGGCGTTTTTCGTTTTCCTTGTTTGTTTCTCTGTTTCTGCTCTTGGCGTTTTCCTTCTCGTTTTCCCCCCCACCTCATGCGAACAAGACGAGGGCTATAGAGAACAGGGGAAGTGGTAATTCCTCAGTTGAAGAACCTCAGGATGCAGATTATGATATTATGCGGTCTCTGAGCGACGAGCTAGAGACACTGATCTTGGCCAGACTTCCAAGATCTGAGCATTGGAAACTATGCTTTCTGAACAAGAGGCTTCAAGCCCTTGTGAAGACTGGTGAAATCATCAAAATCAGGAGAGAAATAGGGTTCAAAGAGCCCACTGTGTTCATGTTAGCAAGTGGAGAGACCAATTGGTGGGCCCTCGATGAACACTTCGAATCCTTCAGAACGCTCCCTTTTATCCCATCAGACTACAATTTCACACACGGAGATAAGGAATCATTCTGTGCAGGTTCCCTTTTGTTTGTTTCAGGCAGGGAATTCGATGGAGCAGCTGTTTGGAAGTACGAGGTAGCAACAAACCAATGGTTGAAGGCTCCTTCCATGAACAATCCTAGGTGCCTGTTCGCATCAGCCAGCTCTGGCAACTATGCTTTCGTCGCAGGTGGTCAAGACGCCAAAACTTATTCTCCGGTCTTGGACTCTGCTGAGAAATACAATTCAAAGAGCAAGTGTTGGGAATCTCTGCCTGGGATGAATCGGAAGAGAAAGTCTTGCTCGGGTTGTTACATGGACAATAAATTCTATGTAATTGGGGGACATGATGAGCAACAAAACGTCCTTACTTGTGGGGAATTCTTTGACGAGAAAACCAACACATGGAACTTAATTCCCGACATGTTGAAAGACATTCCTGTGTCGGCTTCACGGTCCCCACCACTTGTTGCCGTCGCCAATAATCAGCTTTACGCGCTTGACACCTCCTCCAACGAGCTGAAAACGTATCTGAAGCGAAGCAACTCATGGAAGAAGCTAGGAACAGTTCCGGTGGTGGCCAGTGCTCAAGGAGGTTGGGGCGTGGCGTTCAAGTCTCTGGGGAATGAGCTGCTCGTAATCGGTGCCACTGCTACGCCTTCTTCTAGGCGTGGCCTCACGATCTACACTTGTTGCCCTGATCCTTCCGTTGAGGAGCTTCAATGGCGGCGAATTGAATGTGGCAACACGAAGCTTAGTCCCTTCATTCACAATTGTGCTGTGAGGGTAGCGTGA 1230 0.4821 MPQLVAPDRRFSFSLFVSLFLLLAFSFSFSPPPHANKTRAIENRGSGNSSVEEPQDADYDIMRSLSDELETLILARLPRSEHWKLCFLNKRLQALVKTGEIIKIRREIGFKEPTVFMLASGETNWWALDEHFESFRTLPFIPSDYNFTHGDKESFCAGSLLFVSGREFDGAAVWKYEVATNQWLKAPSMNNPRCLFASASSGNYAFVAGGQDAKTYSPVLDSAEKYNSKSKCWESLPGMNRKRKSCSGCYMDNKFYVIGGHDEQQNVLTCGEFFDEKTNTWNLIPDMLKDIPVSASRSPPLVAVANNQLYALDTSSNELKTYLKRSNSWKKLGTVPVVASAQGGWGVAFKSLGNELLVIGATATPSSRRGLTIYTCCPDPSVEELQWRRIECGNTKLSPFIHNCAVRVA 409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g0577 409 Gene3D - 107 391 IPR015915 GO:0005515
Lele05g0577 409 SMART kelc_smart 204 253 IPR006652 GO:0005515
Lele05g0577 409 SMART kelc_smart 254 307 IPR006652 GO:0005515
Lele05g0577 409 SMART kelc_smart 160 203 IPR006652 GO:0005515
Lele05g0577 409 Pfam Kelch motif 192 240 IPR006652 GO:0005515
Lele05g0577 409 Pfam Kelch motif 243 287 IPR006652 GO:0005515
Lele05g0577 409 PANTHER GALACTOSE OXIDASE/KELCH REPEAT PROTEIN-RELATED 58 406 - -
Lele05g0577 409 FunFam F-box/kelch-repeat protein SKIP11 107 392 - -
Lele05g0577 409 SUPERFAMILY Kelch motif 122 384 IPR015915 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g0577 Lele-ChrLele05 3391939 3393954 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele05g0577 65 284 Miscellaneous Gene Families AT4G33900 24.889 1.30e-07 51.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele05g0577 05 3391939 3393954 Lele05g0577 05 3391939 3393954 ECH
Lele05g0577 05 3391939 3393954 Lele07g0604 07 3457193 3459047 hybridization
Lele05g0577 05 3391939 3393954 Lele08g0404 08 2487627 2488811 hybridization