Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g0398 ATGAATAAGAAAACATTGCCTGTGTGGAGCACTGGAAGTGGTTTTCAGGCGAGCAAGACGAGAGCTATGGAGAACAGGGGAAGTGGTAATTCCTCAGGTGAAGAACCTCAGGATGCAGATTATGATATTATGCCGTCTCTGAGCGACGAGCTAGAGACACTGATCTTGGCCAGGCTTCCAAGATCTGAGCATTGGAAACTATGCTTTCTGAACAAGAGGCTTCAAGCCCTTGTGAAGACGGGTGAAATCATCAAAATCAGGAGAGAAATAGGGTTCAAAGAGCCCACTGTGTTCATGTTAGCAAGTGGAGAGACCAATTGGTGGGCTTTCGATGAACACTTGGAATCCTGCAGAATGCTCCCCTTTATCCCTTCAGACTACAATTTCACCCACGGAGATAAGGAATCGTTCTGTGCAGGTTCCCATTTGTTTGTTTCAGGCAGGGAATTCGATGGAGCTGCTATTTGGAAGTACGAGGTAGCAACAAACCAATGGTTGAAGGCTCCCTCCATGAACAATCCTAGGTGTCTGTTCGCATCAGCCAGCTCTGGTAACTCTGCTTTCGTCGCAGGTGGTCAAGACACCAAAACTTATTCTCAGGTCTTGGACTCTGCTGAGAAATACAATTCAAAGAGTAAGTGTTGGGGATCTCTGCCTAGGATGAATCGGAAGAGAAAGTCTTGCTCGGGTTGTTACATGGACAAGAAATTCTATGTAATTGGGGGACAAGATGAGCAACAAAACGTCCTCACTTGTGGCGAATTCTTTGACGAGGAAACCAACACTTGGAACTTAATTCCCGACATGTTGAAAGACATTCCTGTGTCGGTTTCACGGTCCCCACCACTTGTTGCTGTCGCCAATAACCAGCTCTACGCGCTGGATGTTTCCTCCAACGAGCTGAAAACGTACCTGAAGCGAAGCAACTCGTGGAAGAAGCTAGGAACAGTTCCAGTGACGGCTAGTGCTCAAGGAGGTTGGGGTGTGGCGTTCAAGTCTCTGGGGAATGAGCTGTTCGTAATCGGTGCCACTGCTACGTCTTCTTCTCGGCGTGGCCTCACGATCTACACTTGTTGCCCTGATCCTTCCGTAGAGGAGGTTCAATGGCGCCGAATTGAATGTGGCAACACCAAGCTCAGTCCATTCATTCACAATTGTGCTGTGAGGGTAGCTTGA 1176 0.4804 MNKKTLPVWSTGSGFQASKTRAMENRGSGNSSGEEPQDADYDIMPSLSDELETLILARLPRSEHWKLCFLNKRLQALVKTGEIIKIRREIGFKEPTVFMLASGETNWWAFDEHLESCRMLPFIPSDYNFTHGDKESFCAGSHLFVSGREFDGAAIWKYEVATNQWLKAPSMNNPRCLFASASSGNSAFVAGGQDTKTYSQVLDSAEKYNSKSKCWGSLPRMNRKRKSCSGCYMDKKFYVIGGQDEQQNVLTCGEFFDEETNTWNLIPDMLKDIPVSVSRSPPLVAVANNQLYALDVSSNELKTYLKRSNSWKKLGTVPVTASAQGGWGVAFKSLGNELFVIGATATSSSRRGLTIYTCCPDPSVEEVQWRRIECGNTKLSPFIHNCAVRVA 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g0398 391 MobiDBLite consensus disorder prediction 1 35 - -
Lele06g0398 391 SMART kelc_smart 142 185 IPR006652 GO:0005515
Lele06g0398 391 SMART kelc_smart 236 289 IPR006652 GO:0005515
Lele06g0398 391 SMART kelc_smart 186 235 IPR006652 GO:0005515
Lele06g0398 391 Gene3D - 88 373 IPR015915 GO:0005515
Lele06g0398 391 FunFam F-box/kelch-repeat protein SKIP11 89 374 - -
Lele06g0398 391 Pfam Kelch motif 225 269 IPR006652 GO:0005515
Lele06g0398 391 Pfam Kelch motif 174 222 IPR006652 GO:0005515
Lele06g0398 391 PANTHER GALACTOSE OXIDASE/KELCH REPEAT PROTEIN-RELATED 39 388 - -
Lele06g0398 391 SUPERFAMILY Kelch motif 104 366 IPR015915 GO:0005515
Lele06g0398 391 MobiDBLite consensus disorder prediction 1 42 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g0398 Lele-ChrLele06 2442468 2443643 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele06g0398 33 266 Miscellaneous Gene Families AT4G33900 23.750 1.34e-08 54.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele06g0398 06 2442468 2443643 Lele13g1235 13 22665596 22666739 CCT
Lele06g0398 06 2442468 2443643 Lele14g1133 14 21003203 21004323 CCT
Lele06g0398 06 2442468 2443643 Lele15g1223 15 7090721 7091864 CCT
Lele06g0398 06 2442468 2443643 Lele16g1255 16 7101490 7102661 CCT
Lele06g0398 06 2442468 2443643 Lele06g0398 06 2442468 2443643 ECH
Lele06g0398 06 2442468 2443643 Lele07g0604 07 3457193 3459047 hybridization
Lele06g0398 06 2442468 2443643 Lele08g0404 08 2487627 2488811 hybridization