Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele06g0189 ATGCGCACTGTGGATGCCCTCAAGATGCGGTCAACATCTTCTACTTTCACAAGTATTAAGCGGGCAAAAGTCGGGTCGGGTGTACCGACAAATCTTCCTGTTGTTAATGAAGTTTTCAGTTGTCCTCGAGCCATGAGAATTTCACACACATGTCCCCTAGTCACTATTAAACCTCTTGTTGGAAGATACATGCCACCTGAGGCGGTTGCTGTGAGAGTCCCTCTTCTGCATCTCTCTGATTTTCCAATTAATAATTGGCCAGATCTTTCTGCAAACAGAAGATATGCAGTCATAGGTTTGATCCTCCCTACTGATGGTGCTAGAAAATGGCGAGATTATGAATTGGAACTTGTTGATGTAGTAGTAGATCAGGCAGAAGTGGCAGTCCATGGTCGGAATGATTTCATTGCCGTCGTGAATCATGAGATGAGGACACAAATGCTCGCTCTTATGGCATTGTCGGCCCTTCTCCTGGAGACTGAACTGACTCCTGAGCAGAGGATTGTAACAGAGACGACATTGAAGAACAGCAACATGTTGTCAATACTTATTAACGATGTTATAGATCTTTCTAGCCTAGAAGACGGTAGCCTTCCATTAGAATTGGGAAAATTTAACCTTCATGGGGTTGTTGCAGAGGCCATGGAGTTGATAAAGCCTATAGCATCAGTGAAGAAGTTAGTTGTGACCTTAACTCTGGACACGGATCTGCATATCTTTGCCATTGGAGACGGGAAACGTCTAATGCAAACTCTTTTAAACGTTGATTGGCGACCTCTTGAATTTCATTCAGCATCAAGTGATGGTCATCATCACTACATTATAATACAGTTGTTGACTGGCATTGTGGATGTTGAATCAGATTCGTGA 870 0.4322 MRTVDALKMRSTSSTFTSIKRAKVGSGVPTNLPVVNEVFSCPRAMRISHTCPLVTIKPLVGRYMPPEAVAVRVPLLHLSDFPINNWPDLSANRRYAVIGLILPTDGARKWRDYELELVDVVVDQAEVAVHGRNDFIAVVNHEMRTQMLALMALSALLLETELTPEQRIVTETTLKNSNMLSILINDVIDLSSLEDGSLPLELGKFNLHGVVAEAMELIKPIASVKKLVVTLTLDTDLHIFAIGDGKRLMQTLLNVDWRPLEFHSASSDGHHHYIIIQLLTGIVDVESDS 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele06g0189 289 Gene3D - 108 195 - -
Lele06g0189 289 Gene3D - 196 255 IPR036890 -
Lele06g0189 289 PANTHER TWO-COMPONENT SENSOR HISTIDINE KINASE 17 129 - -
Lele06g0189 289 SMART HisKA_10 131 196 IPR003661 GO:0000155|GO:0007165
Lele06g0189 289 ProSiteProfiles Histidine kinase domain profile. 138 289 IPR005467 -
Lele06g0189 289 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 185 255 IPR036890 -
Lele06g0189 289 Pfam His Kinase A (phospho-acceptor) domain 132 196 IPR003661 GO:0000155|GO:0007165
Lele06g0189 289 SUPERFAMILY Homodimeric domain of signal transducing histidine kinase 121 197 IPR036097 GO:0000155|GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele06g0189 Lele-ChrLele06 1162735 1164183 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele06g0189 6 262 Miscellaneous Gene Families AT2G40940 52.027 2.91e-85 265
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele06g0189 06 1162735 1164183 Lele13g2092 13 27858213 27859921 CCT
Lele06g0189 06 1162735 1164183 Lele15g0318 15 1793111 1794819 CCT
Lele06g0189 06 1162735 1164183 Lele16g0329 16 1845143 1847002 CCT
Lele06g0189 06 1162735 1164183 Lele06g0189 06 1162735 1164183 ECH
Lele06g0189 06 1162735 1164183 Lele07g0390 07 2212741 2215234 hybridization
Lele06g0189 06 1162735 1164183 Lele08g0196 08 1204517 1205804 hybridization