Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g1527 ATGTGTTCGGCCCAGATACAGTGCCATTTCCATGTTCTTGCCATGTTGTACCCTCTTGATTTCTTGGCTCTGCAATCGATTCGCAAGTCTCTCAAGGATATGCCTGGGTCGAATTTCTTTGACTCTTGGGATTTCACTGCTGACCCATGTAATTTTACCGGAGTTTACTGTGATTCCGACAAGATTGTTGCCCTTAACCTCGGCGACCCCAGAGCCGGTTCGCCAGGTCTGACAGGGAGGCTCGACCCGGCGATCGGTAAGTTATCTGCTCTATCTGAGTTCACGGTTGTGCCTGGTAGAATCTACGGTTCTATGCCTCAGTCATTCTCTAATTTGAAGAACCTCAGATTCCTTGGCGTTAGCCGGAACTTCATTTCCGGCGACATTCCAGAGCACTTGGGCAGGTTGCGCAATCTCAGAACCCTCGATCTCAGCTACAATCAGCTCACTGGACGCGTTCCTTCATCCATCGGAACCTTACCGCAGCTAAACAACTTTATCCTCTGCCACAATCACCTCTCCGGTTCAGTCCCCTCGTTTGCGTCACACAGCCTAACTCGACTTGACCTGAAGCACAACTCTCTCACGGGCACACTCGCCCCCAATTCTCTCCCTCCCTCCCTCCAATATCTCTCTCTATCCTGGAATAATCTCACCGGTCCAGTGGATCAGCTCTTGAACCGGATGAACGAGTTGAACTACCTGGACCTTAGCTTGAACCGGTTCACGGGTATCATTCCGCCTCGCATATTCTCACTTCCACTTACCAATCTTCAACTGGAGAGGAACCGATTCACCGGCCCTGTCCAACCGGTTAATCAGGTCACAATCCCAACCGTGGATCTTAGCCACAACGAGTTTTCTGGGCAAATATCACCCTTGTTCTCGACCGTGGAGAATCTATACCTGAACAACAACCGGTTCACGGGTCGGGTTCGGAGCACCTTCGTGGATCTGCTATTGGCCTCTCGTATACAGATACTGCATTTGCAGCACAACTATCTGACGGACATTGAGATCAGTCCAACGGCTGAGATTCCTGTGAGCAGCTCATTGTGTCTTCAATACAACTGTATGGTCCGGCCCATACAGACGCCATGCCCCTTGAGGTCTGGGAAACAGATAACGAGGCCTACTGTACAATGCCACCAATGGAGAGGGTAA 1164 0.5077 MCSAQIQCHFHVLAMLYPLDFLALQSIRKSLKDMPGSNFFDSWDFTADPCNFTGVYCDSDKIVALNLGDPRAGSPGLTGRLDPAIGKLSALSEFTVVPGRIYGSMPQSFSNLKNLRFLGVSRNFISGDIPEHLGRLRNLRTLDLSYNQLTGRVPSSIGTLPQLNNFILCHNHLSGSVPSFASHSLTRLDLKHNSLTGTLAPNSLPPSLQYLSLSWNNLTGPVDQLLNRMNELNYLDLSLNRFTGIIPPRIFSLPLTNLQLERNRFTGPVQPVNQVTIPTVDLSHNEFSGQISPLFSTVENLYLNNNRFTGRVRSTFVDLLLASRIQILHLQHNYLTDIEISPTAEIPVSSSLCLQYNCMVRPIQTPCPLRSGKQITRPTVQCHQWRG 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g1527 387 Pfam Leucine Rich repeat 182 197 IPR001611 GO:0005515
Lele05g1527 387 Pfam Leucine Rich repeat 206 220 IPR001611 GO:0005515
Lele05g1527 387 Gene3D Ribonuclease Inhibitor 20 182 IPR032675 -
Lele05g1527 387 Pfam Leucine rich repeat N-terminal domain 20 58 IPR013210 -
Lele05g1527 387 FunFam Nuclear pore complex protein NUP107 19 179 - -
Lele05g1527 387 Pfam Leucine rich repeat 106 149 IPR001611 GO:0005515
Lele05g1527 387 PANTHER LEUCINE-RICH REPEAT (LRR) FAMILY PROTEIN 13 387 - -
Lele05g1527 387 SUPERFAMILY L domain-like 23 365 - -
Lele05g1527 387 Gene3D Ribonuclease Inhibitor 183 365 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g1527 Lele-ChrLele05 9799646 9800809 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele05g1527 103 338 Receptor kinase-like Gene Family AT5G62230 34.000 2.73e-26 109
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele05g1527 05 9799646 9800809 Lele13g2023 13 27492144 27493361 CCT
Lele05g1527 05 9799646 9800809 Lele14g1957 14 25835333 25836562 CCT
Lele05g1527 05 9799646 9800809 Lele15g0381 15 2193305 2194522 CCT
Lele05g1527 05 9799646 9800809 Lele16g0402 16 2191820 2193049 CCT
Lele05g1527 05 9799646 9800809 Lele05g1527 05 9799646 9800809 ECH
Lele05g1527 05 9799646 9800809 Lele07g1587 07 9806952 9808169 hybridization
Lele05g1527 05 9799646 9800809 Lele08g1376 08 8818715 8821072 hybridization