Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g1376 ATGCCGCGGCCGAGGGAGCCGGGATGCGGCATTGTTTACTATATTCTGGTTTTCATGTGTTTGGCACAGATACAGTGCCATTTCCATGTTCTAGCCATGTTGGATCCTCTTGATTTCTTGGCTCTCCAATCGATTCGCAAGTCTCTCAAGGACATGCCGGGCTCGAATTTCTTTGACTCTTGGGATTTCACTGCTGACCCATGTAGTTTTGCCGGAGTTTACTGTGATTCCGACAAGGTTGTTGCCCTCAACCTCGGCGACCCCAGAGCTGGTTCTTCCGGTCTGACAGGTAGGCTCGACCCGGCCATCGGTAAGCTGTCTTCTCTTTCTGAGTTCACGGTTGTGCCTGGTAGAATCTACGGTTCTCTGCCTCAGTCTTTATCTAATTTGAAGAGCCTCAGATTCCTTGGCGTTAGCCGGAACTTCGTTTCCGGTGAGATTCCGGAGCACTTGGGCAGGTTACGCAATCTCAGAACCCTCGATCTCAGCTACAATCAGCTCACTGGACGCATTCCTTCATCCATCGGAGCCATACCGGAGCTAAACAACTTGATCCTCTGCCACAATCACCTCTCCAGTTCAGTCCCCCCGTTTGCTTCACACGTCCTAACTCGACTTGACCTGAAGCACAACTATCTCACGGGCTCGCTCGCTCCCAATTCTCTCCCTCCCTCACTCCAATATCTCTCTCTGTCCTGGAATAATCTGACTGGCCCGGTGGATCGGCTCTTGAACAGGATGAACGAGTTGAACTACCTTGACCTTAGCTTGAACCGGTTCACTGGCATCATCCCGCCTCGCATATTCTCACTCCCACTTACCAATCTTCAACTGGAAAGGAACCAATTCACCGGCCCTGTCCAACCGGTTAATCAAGTCACCATCCCAACCGTGGATCTTAGCCACAACGAGTTTTCGGGTCAAATATCACCCATGTTTTCGACCGTGGAGAATCTATACCTCAACAACAACCGGTTCACGGGTCTGGTTCCGAGCAACTTTGTGGACCGGCTATTGGCCGCTCGGATACAGATCCTGTATTTGCAGCACAACTATCTGACCGACATTGAGATCAGTCCAACGGCTGAGATTCCTGCGAGCAGCTCATTGAATGGTGCCATAACCAGAAATTCAATCCATTTTGATGCCTCAGCAACAGCAGTGGGAACTGATATGGGTTCCCCATAA 1188 0.5076 MPRPREPGCGIVYYILVFMCLAQIQCHFHVLAMLDPLDFLALQSIRKSLKDMPGSNFFDSWDFTADPCSFAGVYCDSDKVVALNLGDPRAGSSGLTGRLDPAIGKLSSLSEFTVVPGRIYGSLPQSLSNLKSLRFLGVSRNFVSGEIPEHLGRLRNLRTLDLSYNQLTGRIPSSIGAIPELNNLILCHNHLSSSVPPFASHVLTRLDLKHNYLTGSLAPNSLPPSLQYLSLSWNNLTGPVDRLLNRMNELNYLDLSLNRFTGIIPPRIFSLPLTNLQLERNQFTGPVQPVNQVTIPTVDLSHNEFSGQISPMFSTVENLYLNNNRFTGLVPSNFVDRLLAARIQILYLQHNYLTDIEISPTAEIPASSSLNGAITRNSIHFDASATAVGTDMGSP 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g1376 395 Gene3D Ribonuclease Inhibitor 38 200 IPR032675 -
Lele08g1376 395 Pfam Leucine Rich repeat 224 238 IPR001611 GO:0005515
Lele08g1376 395 Pfam Leucine Rich Repeat 156 175 IPR001611 GO:0005515
Lele08g1376 395 FunFam Nuclear pore complex protein NUP107 37 197 - -
Lele08g1376 395 Pfam Leucine rich repeat N-terminal domain 38 76 IPR013210 -
Lele08g1376 395 Gene3D Ribonuclease Inhibitor 201 372 IPR032675 -
Lele08g1376 395 SUPERFAMILY L domain-like 46 362 - -
Lele08g1376 395 ProSiteProfiles Leucine-rich repeat profile. 156 178 IPR001611 GO:0005515
Lele08g1376 395 PANTHER LEUCINE-RICH REPEAT (LRR) FAMILY PROTEIN 19 371 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g1376 Lele-ChrLele08 8818715 8821072 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele08g1376 41 354 Receptor kinase-like Gene Family AT5G62230 34.356 5.99e-42 155
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele08g1376 08 8818715 8821072 Lele08g1376 08 8818715 8821072 ECH
Lele05g1527 05 9799646 9800809 Lele08g1376 08 8818715 8821072 hybridization
Lele06g1380 06 8882953 8884170 Lele08g1376 08 8818715 8821072 hybridization