Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele07g1587 ATGGCGTGGCCGAGGGAGCCGGCACGCCGCATTGTTTCCTATATTCTGGTTTTCATGTGTTTGGCACAGATACAGTGCCATTTCCATGTTCTTGCCATGTTGGATCCTCTTGATTTCTTGGCTCTGCAATCGATTCGCAAGTCTCTCAAGGATATGCCTGGGTCGAATTTCTTTGACTCTTGGGATTTCACTGCTGACCCATGTAATTTTGCCGGAGTTTACTGTGACTCCGACAAGATTGTTGCCCTTAACCTCGGCGACCCCAGAGCTGGTTCTCCCGGTCTGACAGGGAGGCTCGACCCGGCGATCGGTAAGCTATCTGCTCTTTCTGAGTTCACGGTTGTGCCTGGTAGAATCTACGGTTCTATGCCTCAGTCATTCTCTAATTTGAAGAACCTCAGATTCCTCGGCGTTAGCCGGAACTTCATTTCCGGCGAGATTCCAGAGCACTTGGGCAGGTTGCGCAATCTCAGAACCCTCGATCTCAGCTACAATCAGCTCACTGGACGCATTCCTTCATCCATCGGAGCCTTACCGGAGCTAAACAACTTGATCCTCTGCCACAATCACCTCTCCGGTTCAGTCCCCTCGTTTGCGTCACACAGCCTAACTCGACTTGACCTGAAGCACAACTCTCTCACGGGCTCACTCGCTCCAAATTCTCTCCCTCCCTCCCTCCAATATCTCTCTCTATCCTGGAATAATCTCACCGGTCCAGTGGATCGGCTCTTGAACCGGATGAACGAGTTGAACTACCTGGACCTTAGCTTGAACCGGTTCACGGGTATCATTCCGCCTCGCATATTCTCGCTTCCACTTACCAATCTTCAACTGGAAAGGAACCAATTCACCGGCCCTGTCCAACCGGTTAATCAGGTCACAATCCCAACGGTGGATCTTAGCCACAACGAGTTTTCTGGGCAAATATCACCCTTGTTCTCGACCGTGGAGAATCTATACCTGAACAACAACCGGTTCACGGGTCGGGTTCCGAGCAACTTCGTGGATCGGCTATTGGCCGCTCGGATACAGATACTGTATTTGCAGCACAACTATCTGACGGACATTGAGATCAGTCCAACGGCTGAGATTCCTGTGAGCAGCTCACTGTGTCTTCAATACAACTGTATGGTCCCGCCCATACAGACGCCATGCCCCTTGAGGTCTGGGAAACAGATAACGAGGCCTACTGTACAATGCCACCAATGGAGAGGGTAA 1218 0.5123 MAWPREPARRIVSYILVFMCLAQIQCHFHVLAMLDPLDFLALQSIRKSLKDMPGSNFFDSWDFTADPCNFAGVYCDSDKIVALNLGDPRAGSPGLTGRLDPAIGKLSALSEFTVVPGRIYGSMPQSFSNLKNLRFLGVSRNFISGEIPEHLGRLRNLRTLDLSYNQLTGRIPSSIGALPELNNLILCHNHLSGSVPSFASHSLTRLDLKHNSLTGSLAPNSLPPSLQYLSLSWNNLTGPVDRLLNRMNELNYLDLSLNRFTGIIPPRIFSLPLTNLQLERNQFTGPVQPVNQVTIPTVDLSHNEFSGQISPLFSTVENLYLNNNRFTGRVPSNFVDRLLAARIQILYLQHNYLTDIEISPTAEIPVSSSLCLQYNCMVPPIQTPCPLRSGKQITRPTVQCHQWRG 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele07g1587 405 PANTHER LEUCINE-RICH REPEAT (LRR) FAMILY PROTEIN 16 405 - -
Lele07g1587 405 Gene3D Ribonuclease Inhibitor 200 383 IPR032675 -
Lele07g1587 405 Pfam Leucine rich repeat 124 167 IPR001611 GO:0005515
Lele07g1587 405 Pfam Leucine rich repeat N-terminal domain 38 76 IPR013210 -
Lele07g1587 405 Gene3D Ribonuclease Inhibitor 38 199 IPR032675 -
Lele07g1587 405 Pfam Leucine Rich repeat 200 215 IPR001611 GO:0005515
Lele07g1587 405 Pfam Leucine Rich repeat 224 238 IPR001611 GO:0005515
Lele07g1587 405 ProSiteProfiles Leucine-rich repeat profile. 156 178 IPR001611 GO:0005515
Lele07g1587 405 FunFam Nuclear pore complex protein NUP107 37 197 - -
Lele07g1587 405 SUPERFAMILY L domain-like 44 383 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele07g1587 Lele-ChrLele07 9806952 9808169 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele07g1587 41 354 Receptor kinase-like Gene Family AT5G62230 33.129 4.11e-40 150
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele07g1587 07 9806952 9808169 Lele07g1587 07 9806952 9808169 ECH
Lele05g1527 05 9799646 9800809 Lele07g1587 07 9806952 9808169 hybridization
Lele06g1380 06 8882953 8884170 Lele07g1587 07 9806952 9808169 hybridization