Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele15g0381 ATGGCGAATCAAAGTTTATCCTGGTGTGGCATTGGTTCGTACGTGCTGCTTTTCATGTGCTTGATACAGATACAAAGTCATTTATACGTGCGTGCCATTTTGGACCCTGTTGATTTCTTGGCTCTGCAATCCATTCGCAAGGCTCTCCAAGACATGCCGGGATCCAGTTTCCTTTCTTCTTGGGATTTCACTTCCGACCCGTGTAACTTCGCCGGTGTTTACTGTGATTCCGATAAGGTCATTGCTCTCAATCTCGGGGATCCCAGAGCCGGTGCCCCTGGCCTAACCGGCAAACTCGACCAGGCCATCGGCAGGCTATCTGCTCTCGCCGAGTTCACCGTAGTTCCGGGTAGGATATACGGCTCTCTGCCACTGACATTATCTAACTTGAAGAGCCTCAGATTCCTCGGCATCAGCCGGAACTTCATTTCCGGCGAGATTCCGGGAACCCTGGGTCAGTTGCGCACTCTCAAAACCCTGGACCTCAGCTACAATCAGTTGACCGGAAGCATTCCTCCGTCCATCGGAGCATTAACGGGGTTGAACAATTTGATCCTCTGCAACAACCGCCTTTCCGGTTCGGTGCCTAAGTTTACATCGGAGACGCTAACCCGGCTCGACCTGAAGCACAATGCTCTCTCCGGTTCGCTGGCTCCCGATTCTCTCCCGGCCTCCCTCCAATATCTGTCCCTATCATGGAACCAGTTGAGTGGGCCCGTGGATCGGCTGTTGAACCGGATGGACCAACTGAACTATCTGGATCTTAGCCTGAACAAGTTCTCGGGCATCATTCCGGGTCGGATATTCTCGTTTCCGCTCACCAATTTACAATTAGAAAGAAATGAATTTTTGGGGGTCGTCCAACCGTATGATCAGGTGAAAATCCCAACCGTTGATCTGAGCTACAACAGGTTGTCAGGCCACGTGTCGCCCATGTTCTCGACCGTACAGAATCTATACCTCAACAGCAACCGGTTCACGGGTCAGGTTCCGAGCAGCTTCGCGGATCGGTTATTGGATGCGACCATACAGATCCTCTACTTACAGCACAATTTTCTGACGGGGATAGCGATCAGTCCGACGGCGGAGATACCTCTAAGCAGCTCCTTGTGTCTACAGTATAATTGTATGGTGCCACCCATAGAGACCACTTGCCCTTTGAAGGCAGGGAAACAGATATCGAGGCCGTATTCTCAATGCGGGCAATGGAGGGGCTAA 1218 0.5172 MANQSLSWCGIGSYVLLFMCLIQIQSHLYVRAILDPVDFLALQSIRKALQDMPGSSFLSSWDFTSDPCNFAGVYCDSDKVIALNLGDPRAGAPGLTGKLDQAIGRLSALAEFTVVPGRIYGSLPLTLSNLKSLRFLGISRNFISGEIPGTLGQLRTLKTLDLSYNQLTGSIPPSIGALTGLNNLILCNNRLSGSVPKFTSETLTRLDLKHNALSGSLAPDSLPASLQYLSLSWNQLSGPVDRLLNRMDQLNYLDLSLNKFSGIIPGRIFSFPLTNLQLERNEFLGVVQPYDQVKIPTVDLSYNRLSGHVSPMFSTVQNLYLNSNRFTGQVPSSFADRLLDATIQILYLQHNFLTGIAISPTAEIPLSSSLCLQYNCMVPPIETTCPLKAGKQISRPYSQCGQWRG 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele15g0381 405 SUPERFAMILY L domain-like 273 377 - -
Lele15g0381 405 Gene3D Ribonuclease Inhibitor 201 385 IPR032675 -
Lele15g0381 405 PANTHER LEUCINE-RICH REPEAT (LRR) FAMILY PROTEIN 15 405 - -
Lele15g0381 405 ProSiteProfiles Leucine-rich repeat profile. 156 178 IPR001611 GO:0005515
Lele15g0381 405 SUPERFAMILY L domain-like 36 286 - -
Lele15g0381 405 FunFam Nuclear pore complex protein NUP107 36 197 - -
Lele15g0381 405 Pfam Leucine Rich repeat 200 215 IPR001611 GO:0005515
Lele15g0381 405 Pfam Leucine Rich repeat 154 169 IPR001611 GO:0005515
Lele15g0381 405 Gene3D Ribonuclease Inhibitor 38 200 IPR032675 -
Lele15g0381 405 Pfam Leucine rich repeat N-terminal domain 38 76 IPR013210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele15g0381 Lele-ChrLele15 2193305 2194522 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele15g0381 27 355 Receptor kinase-like Gene Family AT3G51740 33.515 1.19e-35 137
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele05g1527 05 9799646 9800809 Lele15g0381 15 2193305 2194522 CCT
Lele13g2023 13 27492144 27493361 Lele15g0381 15 2193305 2194522 hybridization
Lele14g1957 14 25835333 25836562 Lele15g0381 15 2193305 2194522 hybridization