Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g1364 ATGAAGACGTTGATGGGGTTTCTATCAGAAGCTGGGGCAATGAGCTTCAGGTGTGGGAATGGAAGAAGAAAGATGGAGGGAGATATCTCTATTTCAGACTTCAGAGCTGGCTTTGGACGTGAGTCTCATCTTTTAGGTGTTACTCCAAATGTCACATGAATGGCCAGAAGCCTAGGAGCATTTCTGGCGCTATTTTTGGCTCTTTCGATCTGCCAAGCTGCGACAAATTTTGAGCTGCTCTCTGACTCTTACCGATCCGCTGCCTTAGAACTCTTCACTCCCATTGATGGATCGTTTTCTAGCTTAGAAGATGCATACGAGGCCTTGAGAGTTTTTGAGATTCTTGCCATTGGAAAGAAGCCAGATGTCAGCACAACTACTTGTCCGAAAGTATTGGAAAATCTTGGGTCATCATCTGCTCTGAAGGATCTGTTCTATGCCTTAAAAGTTAATAGCTTACTAAAATGTGGGGTCAATGAGGAGGTTTTCAAGGATATTGCTTCACGACTTAAAGCCACAATCAACAGTGCAAGTACTTTGCTTGATTTATACTACTCAATAGGAAGTTTGATTCTTATCAAGGATCATGCTTCCAATGTTGATGTCCTTTTGGTTGATGCTGATGGAACTTTTCGTTCTATCAAGGCTTTGAGCCAAAGTGATGGAAGATGGCGTTACAGCTCTACTAATCCAGACCCTAGTGCCTATGCTGCTGGGTTAGCACTTGAAGCACTTGCTGGAGTGGTCTCACTGGCGTCTTCAGAAATTGATCACTCTAGGATCAATGCAGTGAAAAATGATGTATTGAAGCTATTTGACAGAATTGAAAATTATGATGATGGAACCTTTTATTTCGATGAGAAGATAGTTGGTACTGGTGGACAACTAGGTTCCCTTTTCACTACAGCTTCAGTTGTTCGAGGGCTTACAGCATTTGCAGCTGCAATTTCTGGAAAAATAAATCTTCCCGAGGATAAAATTTTGGGTTTAGCAAAATTCTTCCTGGGTATAGGAATCCCAGAAGATGCAAAGGATTTCTTCAATCAAGTAGAGTCATTAGCTTTTCTAGAGAGCAATAGGGTTTCCATCCCATTAATATTGTCACTTCCTACAACAGTTTACTCGTTGACCCAGAAAGAGCAGCTTAAGGTTAGGGTGAATACAGTACTTGGTGCTGCTGCTCCACCTCTAACAGTTAAGCTTGTCCGAGCTTTCAGCACTGGGTCTAAAGGTTCAGCTGTTTTTGAGAGTAAGGTGCTCCAGTATGAACCAACAGGTGGACTTCATGTCTTGGATATTTTCTCAGAGAATGTGGATGTGGGAACTTATGTGTTTGTTTTTGAGATGCTCCTTGAAGATTCGAATAGAAGAAGTGATTATGCTACTGGGGGCCAAACTCATGTGCCAATATACATCACCGGAGTTATTAAAGTTGGCAATGCAGAAATTGCAGTATTGGACAGTGATCTTGGAAGCATTGACACCCAAAAAACGCTAGATTTAACTGGAAATGGTGTAGTTTCACTATCAGCTAACCATCTGGCAAAGTTGCGTTTGTCTTTTCAATTTGCAACATCTCATGGTCATGCTTTTAAGCCTCAACAGGCATTTCTCAAGTTGAGACATGAGACAAATGTTGAGCACATTTTTGTGGTTGGAAGTACCGGCAAGAAGTTTGAAATTGTTCTAGACTTTCTTGGTTTGGTGGAGAAATTTTATTATCTCTCTGGCAGATATGACATTGAGCTGACAATTGGAGATGCTGTCATGGAAAACTCTTTCCTGCGACCTCTTGGCCATATTGAATTGGATCTTCCAGTAGCTCCTGAGAAAGCAGCTCGTCCTCCACTACCACCAGTCGATCCTTACTCAAGATATGGGCCCAAAGCGGAGATAACTCACTTATTTAGGGCTCCTGAAAAGCGACCACCTCAAAATGTGTCTCTCACTTTCTTGAGTTTGACCCTTCTTCCTTTCGTTGGCTTTTTGGTTGGGCTATTACGCTTAGGAGTGAACCTAAAGAATTTCCCCTCAGCAGCAGTACCTGCTACATATGCCATCCTCTTCCATGCTGGCATTGCTGCAGTTCTGGTACTCTATTTAGTTTTCTGGTTAAAGCTGGACCTGTTCACTACGCTGAAAACATTGGGTATTTTGGGAGCCTTTTTGATGTTTGTGGGACATGCAATTTTATCGCATCTGGCTTCTTCATCAGCCAAGTTGAAGTCTGCCTGA 2235 0.4233 MKTLMGFLSEAGAMSFRCGNGRRKMEGDISISDFRAGFGRESHLLGVTPNVTXMARSLGAFLALFLALSICQAATNFELLSDSYRSAALELFTPIDGSFSSLEDAYEALRVFEILAIGKKPDVSTTTCPKVLENLGSSSALKDLFYALKVNSLLKCGVNEEVFKDIASRLKATINSASTLLDLYYSIGSLILIKDHASNVDVLLVDADGTFRSIKALSQSDGRWRYSSTNPDPSAYAAGLALEALAGVVSLASSEIDHSRINAVKNDVLKLFDRIENYDDGTFYFDEKIVGTGGQLGSLFTTASVVRGLTAFAAAISGKINLPEDKILGLAKFFLGIGIPEDAKDFFNQVESLAFLESNRVSIPLILSLPTTVYSLTQKEQLKVRVNTVLGAAAPPLTVKLVRAFSTGSKGSAVFESKVLQYEPTGGLHVLDIFSENVDVGTYVFVFEMLLEDSNRRSDYATGGQTHVPIYITGVIKVGNAEIAVLDSDLGSIDTQKTLDLTGNGVVSLSANHLAKLRLSFQFATSHGHAFKPQQAFLKLRHETNVEHIFVVGSTGKKFEIVLDFLGLVEKFYYLSGRYDIELTIGDAVMENSFLRPLGHIELDLPVAPEKAARPPLPPVDPYSRYGPKAEITHLFRAPEKRPPQNVSLTFLSLTLLPFVGFLVGLLRLGVNLKNFPSAAVPATYAILFHAGIAAVLVLYLVFWLKLDLFTTLKTLGILGAFLMFVGHAILSHLASSSAKLKSA 744
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g1364 744 Pfam Oligosaccharyltransferase subunit Ribophorin II 61 736 IPR008814 GO:0006487|GO:0008250|GO:0016020
Lele05g1364 744 PANTHER RIBOPHORIN II 64 743 IPR008814 GO:0006487|GO:0008250|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g1364 Lele-ChrLele05 8554221 8569824 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele05g1364 05 8554221 8569824 Lele13g1914 13 26805225 26811526 CCT
Lele05g1364 05 8554221 8569824 Lele14g1850 14 25146409 25154756 CCT
Lele05g1364 05 8554221 8569824 Lele15g0493 15 2906648 2912996 CCT
Lele05g1364 05 8554221 8569824 Lele16g0515 16 2859910 2866075 CCT
Lele13g1905 13 26765390 26769149 Lele05g1364 05 8554221 8569824 CCT
Lele14g1842 14 25113262 25116662 Lele05g1364 05 8554221 8569824 CCT
Lele15g0503 15 2952971 2956724 Lele05g1364 05 8554221 8569824 CCT
Lele16g0524 16 2895514 2898938 Lele05g1364 05 8554221 8569824 CCT
Lele05g1364 05 8554221 8569824 Lele05g1364 05 8554221 8569824 ECH
Lele05g1364 05 8554221 8569824 Lele07g1424 07 8622719 8633613 hybridization
Lele05g1364 05 8554221 8569824 Lele08g1221 08 7694351 7703571 hybridization