Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele07g1424 ATGGAAGAAGAAAGATGGAGGGAGATATCTCTATTTCAGACTTTAGAACTGGCTTTAGACGTGGGTCTCCGCTTTGAAGGGTTGCTCCAAATGTCACCTCTGGTGAGTCCATTTAAGACCCGCTCAAAGGCAAAGGATGGGGAAGGAGGAGCGAAATTATTAGTTTCAGCCTCGTACTCTCAGTTGAAGTCGTCGCCTTCGAAGTGCAACAAGTACGGCACCGATCTATTCTCTGGAATGGCCAGAAGCCTAGGAGCATTTCTGGCGCTTATTTTGGCTCTTTCGATCTGCCAAGCTGCGACAAATTTTGAGCTGATCTCTGACTCTTACCGATCCGCTGCCTTAGAACTCTTCACTCCCATTGATGGATCGTTTTCTAGCTTAGAAGATGCATACGAGGCCTTGAGAGTTTTTGAGATTCTTGCCATTGGAAAGAAGCTAGATGTCAGCACAACTACTTGTCCGAAAGTATTGGAAAATCTTGGGTCATCATCTCCTCTGAAGGATTTGTTCTATGCCTTAAAAGTTAATAGCTTACTAAAATGTGGGGTCAATGAGGAAGTTTTCAAGGATATTGCTTCACGAATTAAAGCCACAATCAACAATGCAAGTACTTTGCTTGATTTATACTACTCAATAGGAAGTTTGATTCTTATCAAGGATCATGCTTCCAATGTTGATGTCCTTTTGGCTGATGCTGATGGAACTTTTCGTTCTATCAAGGCTTTGAGCCAAAGTGATGGAAGATGGCGTTACAGCTCTACTAATCCAGACCCTAGTGCCTATGCTGCTGGGTTAGCACTTGAAGCACTTGCTGGAGTGGTCTCATTGGCATCTTCAGAAATTGATCACTCTAGGATCAATGCAGTGAAAAATGATGTATTGAAGCTATTTGACAGAATTGAAAATTATGATGATGGAACCTTTTATTTCGATGAGAAGATAGTTGGTACTGGTGGACAACTGGGTTCCCTTTTCACTACAGCTTCAGTTGTTCGAGGGCTTACAGCATTTGCAGCTGCAATTTCTGGAAAAATAAATCTTCCCGAGGATAAAATTTTGGGTTTAGCAAAATTCTTCCTGGGTATAGGAATCCCAGAAGATGCAAAGGATTTCTTCAATCAAGTAGAGTCATTTGCTTTTCTAGAGAGCAATAGGGTTTCCATCCCATTAATATTGTCACTTCCTACAACAGTTTACTCGTTGACCCAGAAAGAGCAGCTTAAGGTTAGGGTGAATACCGTACTTGGTGCTGCTGCTCCACCTCTAACAGTTAAGCTTGTCCGAGCTTTCAGCACCGGGTCTAAAGGTTCAGCTGTTTTTGAGAGTAAGGAGCTCCAGTATGAACCAACAAGTGGACTTCATGTCTTGGATATTTTCTCAGAGACTGTGGATGTGGGAACTTATGTGTTTGTTTTTGAGATGCTCCTTGAAGATTCGAATAGAAGAAGTGATTATGCTACTGGGGGCCAAACTCATGTGCCAATATACATCACCGGAGTTATTAAAGTTGGCAATGCAGAAATTGCAGTATTGGACAGTGATCTTGGAAGCATTGACACCCAAAAAACGCTAGATTTAACTGGAAATGGTGTATTTTCACTATCAGCTAACCACCTGGCAAAGTTGCGTTTGTCTTTTCAATTGACGACGTCTCATGGTCATGCTTTTAAGCCTCAACAGGCATTTCTCAAGTTGAGACATGAGACAAATGTTGAGCACATTTTTGTGGTTGAAAGTACCGGCAAGAAGTTTGAAATTGTTCTAGACTTTCTTGGTTTGGTGGAGAAATTTTATTATCTCTCTGGCAGATATGACATTGAGCTGACAATTGGAGATGCTGTCATGGAAAACTCTTTCCTGCGACCTCTTGGCCATATTGAATTGGATCTTCCAGTAGCTCCTGAGAAGGCAGCCCGTCCTCCACCACCACCAGTCGATCCTTACTCAAGATATGGGCCCAAAGCGGAGATAACTCACTTATTTAGGGCTCCTGAAAAGCGACCACCTCAAAATGTGTCTCTCACTTTCTTGAGTTTGACCCTTCTGCCTTTCATTGGCTTTTTGGTTGGGCTATTACGCTTAGGAGTGAACCTAAAGAATTTCCCTTCAGCAACAGTACCTGCTACATATGCCATAATCTTCCATGCTGGCATCGCTGCAGTTCTGTTACTTTATTTATTTTTCTGGTTAAAGCTGGACCTGTTCACTACGCTGAAAACACTGGGTATTTTGGGAGCCTTTTTGATGTTTGTGGGACATGGAATTTTATCGCATCTGGCTTCTTCATCGGCCAAGTTGAAGTCTGCCTGA 2313 0.425 MEEERWREISLFQTLELALDVGLRFEGLLQMSPLVSPFKTRSKAKDGEGGAKLLVSASYSQLKSSPSKCNKYGTDLFSGMARSLGAFLALILALSICQAATNFELISDSYRSAALELFTPIDGSFSSLEDAYEALRVFEILAIGKKLDVSTTTCPKVLENLGSSSPLKDLFYALKVNSLLKCGVNEEVFKDIASRIKATINNASTLLDLYYSIGSLILIKDHASNVDVLLADADGTFRSIKALSQSDGRWRYSSTNPDPSAYAAGLALEALAGVVSLASSEIDHSRINAVKNDVLKLFDRIENYDDGTFYFDEKIVGTGGQLGSLFTTASVVRGLTAFAAAISGKINLPEDKILGLAKFFLGIGIPEDAKDFFNQVESFAFLESNRVSIPLILSLPTTVYSLTQKEQLKVRVNTVLGAAAPPLTVKLVRAFSTGSKGSAVFESKELQYEPTSGLHVLDIFSETVDVGTYVFVFEMLLEDSNRRSDYATGGQTHVPIYITGVIKVGNAEIAVLDSDLGSIDTQKTLDLTGNGVFSLSANHLAKLRLSFQLTTSHGHAFKPQQAFLKLRHETNVEHIFVVESTGKKFEIVLDFLGLVEKFYYLSGRYDIELTIGDAVMENSFLRPLGHIELDLPVAPEKAARPPPPPVDPYSRYGPKAEITHLFRAPEKRPPQNVSLTFLSLTLLPFIGFLVGLLRLGVNLKNFPSATVPATYAIIFHAGIAAVLLLYLFFWLKLDLFTTLKTLGILGAFLMFVGHGILSHLASSSAKLKSA 770
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele07g1424 770 Pfam Oligosaccharyltransferase subunit Ribophorin II 87 762 IPR008814 GO:0006487|GO:0008250|GO:0016020
Lele07g1424 770 PANTHER RIBOPHORIN II 89 769 IPR008814 GO:0006487|GO:0008250|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele07g1424 Lele-ChrLele07 8622719 8633613 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele13g1905 13 26765390 26769149 Lele07g1424 07 8622719 8633613 CCT
Lele14g1842 14 25113262 25116662 Lele07g1424 07 8622719 8633613 CCT
Lele15g0503 15 2952971 2956724 Lele07g1424 07 8622719 8633613 CCT
Lele16g0524 16 2895514 2898938 Lele07g1424 07 8622719 8633613 CCT
Lele07g1424 07 8622719 8633613 Lele07g1424 07 8622719 8633613 ECH
Lele05g1364 05 8554221 8569824 Lele07g1424 07 8622719 8633613 hybridization
Lele06g1225 06 7726175 7735254 Lele07g1424 07 8622719 8633613 hybridization