Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele16g0515 ATGTTTTGTGCACGAATGGCCACAAACCTAGCTGTTTTTCTGGTGTTGCTTCTGGCTATTTCGATCTGTGAAGCGGCGACGATTTACGAGCCGATCTCGGATTCTCATCGAACTGTGGCTTTAGAGCTCTTCGCGCCTATTAATGGATCTTATGCTAGTTTGGAAGATACATATGAGGCCTTGAGCATTTATGAGATTCTTGCCATAGAAAAGAAGCCCGATGTGATCACAACCGCTTGTCAAAAAGTATTGGAGATTCTCGGGTCATCATCTCCTCCAAAGGATGTGTTCTATGCCTTAAAAGTTAATGGAAAATTGAAATGCAAGGTTGATGAGAAGGTTCTCAAGAATATTGCTTCAAGACTTAAAGCCACTGTCAGTGATACAAGTACGTTGCTCGACATCTACTATTCAATAGGAAGTCTGGTTCTTATAAAGGATCAGACTTCTATTGTTGATGTGCTTCTTGCTGATGGTGATGGGACTTTTCAATCAATCAAGGCTCTGAGCCAGAGTGATGGAAGATGGCGCTATAGCCCTGATAACCCTGAGTCTAGTACATATGCTGCTGGATTAGCACTTGAAGCATTTGCTGGAGTGATCTCACTAGCATCTTCTGAAATTGATCAGTCTAGGATTGATATGGTGAAAAATGATATATTGAAGCTTTTTGACAGCATTGAGAAATATGATGATGGGACCTTTTATTTTGATGAGAAAATTGTTGGTGGACGTGAGTATCAGGGTTCTCTTTCCACAACTGCTTCAGTTGTGCGGGGGCTTACAGCATTTTCTGCCATAACTTTCGAAAAATTAAATCTCCCAGGTGATAAAATATTGGGTTTGGCAAAGTTCTTCTTGGGCATTGGAATCCCAGGAGATGCAAAGGACTTCTTCAATCAAATAGAATCATTAGCTTTTCTAGAGAACAACAGGGTCGCCACTCCATTGATACTGTCTCTTCCTGAAACTGTTTTTTCATTAACCAGTCTAGATTTGCTTAAGGTTAAGGTGAATACAGTGCTTGGTTCAGCTGCGCCACCTTTAACAGTTAAACTTGTTCGAGCATTCAAAACTGGTGCTGATGATTCATCTATTATTGAGAGTAAGGAACTCCAGTATGACTCAAAAAGTGGACTTCATGTCTTCAGTTTTCTCTCAAAGAATGTGGATGTGGGAACTTATACGTGTGTTTTTGAGATGGTGCTTCATGGAACTGATAATGATAAAGCATATGCCACGGGAGACCAAATTCACCTGCCAATATATGTCACTGGAATTATTAAAGTTGGCAATGCAGAAATTGCTGTTCTCGACAGTGATCTTGGAAGTGTTGAAACCCAAAAAACGTTGGATTTGTCCAGAAATAACGTTGTGTCATTCTCAGCTAACCACCTGCAGAAGTTGCGTTTGTCATTTCAATTGACAATGCCTAATGGTCGTGCTTTCAAGCCACATCAGGCATTTCTTAAGTTGAGACATGAGACAAAGGTCGAACACATCTTTGTGGTTGGGAACACTGGCCAGAAGTTTGAGATCATTCTTGATTTTCTTGGCTTGGTGGAAAAATTCTTTTATCTTTCAGGCACATACGACATTGAGCTGACTGTTGGTGATGCTGTCATGGAGAACTCTTTCTTACAGCCTCTGGGCCATGTTGAATTGGATCTTCCAGTTGCACCTGAAAAGGGAGCTCGCCCTCCTGCTCCGCCTGTTGATCCTTATTCAAGATATGGACCCAGAGAAGAGATAATCCACTTATTCAGGGCTCCTGAAAAGCGACCACCCCAGAATCTCTCGCTAGCTTTCTTGATTTTGACCATTTTTCCATTGATTGGCTTTTTGGTTGGTCTTTTACGATTAGGAGTGAACCTGAAGAACTTCCCTGCTTCATCAGTAAATGCTCTCTATGCTGCTCTGTTCCATCTTGGAATTGTTGCAGTTCTGTCGCTTTATGTGCTCTTCTGGTTGAAGCTGGACCTGTTCACCACACTCAAAACACTAGGTATTTTGGGAGCCTTTTTGATGTTTGTGGGACACAGAAGTCTTTCCTATCTTGCTTCGATATCTGCCAAGTTGAAGTCTGCATGA 2091 0.4165 MFCARMATNLAVFLVLLLAISICEAATIYEPISDSHRTVALELFAPINGSYASLEDTYEALSIYEILAIEKKPDVITTACQKVLEILGSSSPPKDVFYALKVNGKLKCKVDEKVLKNIASRLKATVSDTSTLLDIYYSIGSLVLIKDQTSIVDVLLADGDGTFQSIKALSQSDGRWRYSPDNPESSTYAAGLALEAFAGVISLASSEIDQSRIDMVKNDILKLFDSIEKYDDGTFYFDEKIVGGREYQGSLSTTASVVRGLTAFSAITFEKLNLPGDKILGLAKFFLGIGIPGDAKDFFNQIESLAFLENNRVATPLILSLPETVFSLTSLDLLKVKVNTVLGSAAPPLTVKLVRAFKTGADDSSIIESKELQYDSKSGLHVFSFLSKNVDVGTYTCVFEMVLHGTDNDKAYATGDQIHLPIYVTGIIKVGNAEIAVLDSDLGSVETQKTLDLSRNNVVSFSANHLQKLRLSFQLTMPNGRAFKPHQAFLKLRHETKVEHIFVVGNTGQKFEIILDFLGLVEKFFYLSGTYDIELTVGDAVMENSFLQPLGHVELDLPVAPEKGARPPAPPVDPYSRYGPREEIIHLFRAPEKRPPQNLSLAFLILTIFPLIGFLVGLLRLGVNLKNFPASSVNALYAALFHLGIVAVLSLYVLFWLKLDLFTTLKTLGILGAFLMFVGHRSLSYLASISAKLKSA 696
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele16g0515 696 Pfam Oligosaccharyltransferase subunit Ribophorin II 13 688 IPR008814 GO:0006487|GO:0008250|GO:0016020
Lele16g0515 696 PANTHER RIBOPHORIN II 14 695 IPR008814 GO:0006487|GO:0008250|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele16g0515 Lele-ChrLele16 2859910 2866075 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele05g1364 05 8554221 8569824 Lele16g0515 16 2859910 2866075 CCT
Lele13g1914 13 26805225 26811526 Lele16g0515 16 2859910 2866075 hybridization
Lele14g1850 14 25146409 25154756 Lele16g0515 16 2859910 2866075 hybridization