Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele15g0493 ATGTTTCATACACGTATGATTTGAATGGCCAGAAACCTAGCTGTATTTCTGGTGTTGCTTCTGGCTATTTCGATCTGTGAAGCGGCGACGATTTACGAGCCGATCTCGGATTCTCATCGAACTGTGGCTTTAGAGCTCTTCGCGCCTATTAATGGATCATATGCTAGTTTAGAAGATACATATGAGGCCTTGAGCATTTATGAGATTCTTGCCATAGAAAAGAAGCCTGATGTGAGCACAACCGCTTGTCAAAAAGTATTGGAGATTCTTGGGTCATCATCTCCTCCAAAGGATGTGTTCTATGCCTTAAGAGTTAATGGCAAATTGAAATGCAAGGTTGATGTGAAGGTTCTCAAGAATATTGCTTCAAGACTTCAAGCCTCTGTCAGTGATGCAAGTACGTTGCTCGACATATACTATTCATTAGGAAGTCTGGTTCTCATAAAGGATCAGACTTCTAATGTTGATGTGCTTCTTGCTGATGGTGATGGGACTTTTCAGTCAATCAAGGCTCTGAGCCAGAGTGATGGAAGATGGCGCTACAGCCCTGATAACCCTGAGTCTAGTACATATGCTGCTGGATTAGCACTTGAAGCGTTTGCTGGAGTGATCTCACTGGCATCTTCTGAAATTGATCAGTCTAGGATTGATATGGTGAAAAATGATATATTGAAGCTTTTTGACAGCATTGAGAAATATGATGATGGGACATTTTATTTTGATGAGAAAATTGTTGGTGGACGTGAGTATCAGGGTTCTCTTTCCACAACTGCTTCAGTAATGCGGGGGCTTACTGCATTTTCTGCCATGACTTCCGAAAAATTAAATCTCCCAGGGGATAAAATATTGGGTTTGGCAAAGTTCTTCTTGGGTATTGGAATCCCAGGAGATGCAAAGGACTTCTTCAATCAAATAGAATCATTAGCTTTTCTGGAGAACAACAGGGTCGCCACCCCATTGATACTGTCTCTTCCTGAAACTGTTTTTTCATTAACCAATCAAGATTTGCTCAAGGTTAAGGTGAATACAGTGCTTGGTTCAGCTGCGCCACCTTTAACAGTTAAACTTGTTCGAGCATTCAAAACTGGCGCTAAAGATTCATCTATTATTGAGAGTAAGGAACTCCAGTATGACTCAGAAAGTGGACTTCATGTCTTCAGTTTTCTCTCAAAGAATGTGGATGTGGGAACTTATATGTTTGTTTTTGAGATGGTGCTTCATGGAACTGATAATGATAAAGTATATACCACAGGAGGCCAAATTCACGTGCCAATATATGTCACTGGAATTATTAAAGTTGGCAATGCAGAAATTGCTGTTCTCGACAGTGATTTTGGAAGTGTTGAAACCCAAAAAACGTTGGATTTGTCCAGAAATAACGCTGTGTCATTCTCAGCTAACCACCTGCAGAAGTTGCGTTTTTCATTTCAATTGACAATGCCTAATGGTCATTCTTTCAAGCCACATCAGGCATTTCTTAAGTTGAGACATGAGACAAAGGTTGAACACATCTTTGTGGTTGGGAACACTGGCCAGAAGTTTGAGATCATTCTTGATTTTCTTGGCTTGGTGGAAAAATTCTTTTATCTCTCAGGCAGATACGACATTGAGCTGACTGTTGGTGATACTGTCATGGAGAACTCTTTCTTACGGCCTCTGGGCCATGTTGAATTAGATCTTCCAGTTCCACCTGAAAAGGGACCTCGCCCTCCTGCTCCGCCTGTTGATCCTTATTCAAGATATGGACCCAAAGAAGAGATAATCCACTTATTCAGGGCTCCTGAAAAGCGACCACCCCAGAATCTCTCGCTAGCTTTCTTGATTTTGACCATTTTGCCACTGATTGGCTTTTTGGTTGGTCTTTTACGATTAGGAGTGAACCTGAAGAACTTCCCTGCTTCATCAGTAAATGCTCTCTATGCTGCTCTGTTCCATCTTGGCATTGCTGCAGTTCTGTTGCTTTATGTGCTTTTCTGGTTGAAGCTGGACCTGTTCACCACACTCAAGACACTAGGTCTTTTGGGAGCCTTTTTGATGTTTGTGGGACACAGAAGTCTTTCCTATCTTGCTTCTACTTCAGCCAAGTTGAAGTCTTCATGA 2100 0.4167 MFHTRMIXMARNLAVFLVLLLAISICEAATIYEPISDSHRTVALELFAPINGSYASLEDTYEALSIYEILAIEKKPDVSTTACQKVLEILGSSSPPKDVFYALRVNGKLKCKVDVKVLKNIASRLQASVSDASTLLDIYYSLGSLVLIKDQTSNVDVLLADGDGTFQSIKALSQSDGRWRYSPDNPESSTYAAGLALEAFAGVISLASSEIDQSRIDMVKNDILKLFDSIEKYDDGTFYFDEKIVGGREYQGSLSTTASVMRGLTAFSAMTSEKLNLPGDKILGLAKFFLGIGIPGDAKDFFNQIESLAFLENNRVATPLILSLPETVFSLTNQDLLKVKVNTVLGSAAPPLTVKLVRAFKTGAKDSSIIESKELQYDSESGLHVFSFLSKNVDVGTYMFVFEMVLHGTDNDKVYTTGGQIHVPIYVTGIIKVGNAEIAVLDSDFGSVETQKTLDLSRNNAVSFSANHLQKLRFSFQLTMPNGHSFKPHQAFLKLRHETKVEHIFVVGNTGQKFEIILDFLGLVEKFFYLSGRYDIELTVGDTVMENSFLRPLGHVELDLPVPPEKGPRPPAPPVDPYSRYGPKEEIIHLFRAPEKRPPQNLSLAFLILTILPLIGFLVGLLRLGVNLKNFPASSVNALYAALFHLGIAAVLLLYVLFWLKLDLFTTLKTLGLLGAFLMFVGHRSLSYLASTSAKLKSS 699
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele15g0493 699 Pfam Oligosaccharyltransferase subunit Ribophorin II 16 691 IPR008814 GO:0006487|GO:0008250|GO:0016020
Lele15g0493 699 PANTHER RIBOPHORIN II 17 698 IPR008814 GO:0006487|GO:0008250|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele15g0493 Lele-ChrLele15 2906648 2912996 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele05g1364 05 8554221 8569824 Lele15g0493 15 2906648 2912996 CCT
Lele13g1914 13 26805225 26811526 Lele15g0493 15 2906648 2912996 hybridization
Lele14g1850 14 25146409 25154756 Lele15g0493 15 2906648 2912996 hybridization