Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g1120 ATGGGGGGTGAAACGGCGAACGGGTCCTGGTTCAGTGTATTTTGGCCTGTCTCTCGCAAAACTGCACTTGACAACAAGGCGTCAATCGGAATTTTGGCATCAGAAGTTGCCAGCTTGATGCAAAAAGTGGTCAATTTATGGCGTTCACTGAGTGATATGGAGGTAATGGGTCTGAAAGAAGAGATTATAAATTCAGTTGGGATTAAGATTCTGGTGTCTGATAATGATGATTTCTTAATGGAACTTGCATTGAATGAGATACTTGATAATTTTGAATATCTCGCAAGGTCTGTGGCTAGGTTGGGTAAGAGGTGCACTGATCCGGTATACCATCGTTTTGAACTTTTTGTTGATAACCCGGCCCAGTATAGTTTTCAGTGGTCTGGATGGGAATATAAATCTAAAAAGATGGAAAAGAAGGTGAAAAAAATGGAAAGATTTGCTGCTGCTATGACACAATTGTCCCAAGAGCTCGAGGTACTTGCTGAGCTTGAACAAACATTCAGGAGAATGCAGGCAAATCCCGAGCAGAGCCGAATGAAATTGCTTGAGTTCCAGAAAAAGGTCAATTGGCAGCGCCAAGAAGTGAAAAATCTTAGACACATGTCTCCTTGGAATAGAAGTTATGATTATATTGTCCGGTTGCTGGCGAAATCACTCTTAACAATACTTGAGAGGATTATACATGTTTACGGAAATAGTCATCTGTCAACTCAGCAACAGAATGATTGTCCGGATATGGATGCTAGCCGTCTTCCACGCAGCCATTCCTTTTCTGTTCCAATGTATTCTTTTCACCCATCATATAATCAGTTTTATGGATTTCATTCAGAACCACTTGGGAGCAGGCCAGTGTCAAACTCAGACTCTGTAACTGACAAGAGCAAAAGAGCAACCGCGCTTCAACAAGCTCTTACTGCGCCCATTTTACGTGGGAAGCATCTTCGTTCGGCGAGTAAACAGTTAGCTCATATTGGTCCCTTCAAAGGATGCATGTGGGTAGGAAATGAGTCTCCTGTTGTACAGAGCTGCATGCCAACAACTGGAGGTTCTATGAGGTTGAATGACTGCCATATGAAAAATGTTGATAAAATGAACATTGTGGATAAATTATCTCTCTCTTGTAGGAATAGAATATTTTCTAAATTATCCATCAAAGGTCGATTAAAGCCACCTCCAATTACCCTCGGCGATTCTGCTTTGGCTCTTCATTATGCAAATGTTATTATATTAATAGAGAGAATGGTATCATCGCCTCACTTGGTTGACCTTGAAACTAGAGATGATCTGTATAATATGTTACCAGCAGCCATGAGAAGTGCTCTGAGAGCTAAGCTTAAGTGGTGCACCAAAAGTAAGGATTCTTCTTTCTATGATGCTAATCTTGCAGAAGGATGGATTCAGGCACTCGCACAAATACTAGAATGGTTGGCCCCACTCGCACATAACATGATAAAATGGCATTCTGAGAGGAATTTTGAGAAGGAGTACACCACTTCAAAAGCAAATGTTTTACTCGTCCAAACTCTTTACTTTGCAAACCAACCAGAAACTGAATCTGCAATGATAGAGCTTCTTGTCGGCCTGAATTACGTATGCAGGATTGATAGAGAAATTGGCAGAAGAGATCCGGCTGAGCTTGCTGGTGCTAGATCTTGTAATGGTGTTTGTTTGGAAAAGAATGATATCTATAATGAATATGCTTAG 1707 0.4107 MGGETANGSWFSVFWPVSRKTALDNKASIGILASEVASLMQKVVNLWRSLSDMEVMGLKEEIINSVGIKILVSDNDDFLMELALNEILDNFEYLARSVARLGKRCTDPVYHRFELFVDNPAQYSFQWSGWEYKSKKMEKKVKKMERFAAAMTQLSQELEVLAELEQTFRRMQANPEQSRMKLLEFQKKVNWQRQEVKNLRHMSPWNRSYDYIVRLLAKSLLTILERIIHVYGNSHLSTQQQNDCPDMDASRLPRSHSFSVPMYSFHPSYNQFYGFHSEPLGSRPVSNSDSVTDKSKRATALQQALTAPILRGKHLRSASKQLAHIGPFKGCMWVGNESPVVQSCMPTTGGSMRLNDCHMKNVDKMNIVDKLSLSCRNRIFSKLSIKGRLKPPPITLGDSALALHYANVIILIERMVSSPHLVDLETRDDLYNMLPAAMRSALRAKLKWCTKSKDSSFYDANLAEGWIQALAQILEWLAPLAHNMIKWHSERNFEKEYTTSKANVLLVQTLYFANQPETESAMIELLVGLNYVCRIDREIGRRDPAELAGARSCNGVCLEKNDIYNEYA 568
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g1120 568 Coils Coil 144 174 - -
Lele05g1120 568 Pfam Domain of unknown function (DUF3475) 31 87 IPR021864 GO:0045927
Lele05g1120 568 Pfam Protein of unknown function (DUF668) 395 486 IPR007700 GO:0045927
Lele05g1120 568 PANTHER BNAC09G50660D PROTEIN 23 543 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g1120 Lele-ChrLele05 7001442 7003148 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele05g1120 05 7001442 7003148 Lele13g1695 13 25572978 25575586 CCT
Lele05g1120 05 7001442 7003148 Lele14g1638 14 23965682 23967319 CCT
Lele05g1120 05 7001442 7003148 Lele15g0718 15 4138151 4139722 CCT
Lele05g1120 05 7001442 7003148 Lele16g0725 16 4081194 4082846 CCT
Lele05g1120 05 7001442 7003148 Lele05g1120 05 7001442 7003148 ECH
Lele05g1120 05 7001442 7003148 Lele07g1163 07 7036939 7038648 hybridization
Lele05g1120 05 7001442 7003148 Lele08g0972 08 6174712 6176421 hybridization