Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele15g0718 ATGAGGGGTGACATGATGAATGGTTCATGGATCAGTGCTATGCGGGCTGTCTCCCTCAAGTCTGCATCAGATGACAAGGCTGTAATGGGAATTTTGGCATCAGAAGTCTCTAGCTTGATGTTGAAGGTGGTTAATTTATGGAACTCTTTGAGCGACGTGGAGGTAATGAGTTTGAGGGAGGAAATAGTAAATTCACTTGGGGTCAAAATGCTGGTTTCTAACGATGATAGTTACTTGATGGAACTTGCATTGAATGAGATACTCAATAACTTCCAATGCCTAGCAAGGTCCGTGGGCAGGTTGAGTAAGAGGTGCGAGAATCCAGTGTATCGTCGTTATAAACAGTTTGTGGATGATCCAGTTGGGAATTGTTTTCAATGGTCAGGGTGGGAATATAGGTGGAAAAAGATGGACAGGAAGGTAAAGAAAATGGAAAGATTTGCAGCAGCCATGTCACAATTATCCCAGGAGCTTGAAGTCTTGGCAGAGCGAGAACGGACTTTCAGGAGAATGTGGGCAAATCCTGAGTCGAGTCGAGCCAAATTGCTCGAGTTTAAGAAAAAGGTCAAGTTGCATCGCGAAGAAGTAAAAACTCTGAGAGACATGTCTCCGTGGAATAAAAGTTATGACTATATTGTCCGCTTGTTGACAAGATCGCTATTTACAATTCTAGAGAGGGTCGTACATGTCTTTGGAAATTATCCTCAGCGGCCAATCGAACATCTAGAAGATGATTCTGAATGGTTCAATAGTGTCCCCCTTCGACGGACTCGTTCCTTCGCTTCTCCTATGCATTTTTTTGTCCATCAAGCGCAGAATGATCCGAATGAGTTGGATACAGAACAACTTGGGTGGAGGCATGTAGTTGACAATAGCAAAGGAAAGAAGAAACAGCAACAAGCGCTTCATTTAGAAATCAAGCACTTGGGATATGTTGGTCCTTCCAAAGGATGCGGGTCTGTAGAAACTGATTCTCCTGTTGTACCAAGTTGTAGGGGGGCAACAAAGGGTGGCTCTGTGAGGACAAATGATAATTCATTTATATTCAATAGGATAAGCATATATTCCAAACTATCCATCCATAGTGGATCATCAAGACCACTTCCGTTTACTCTCGGTGATGCTTCTTTAGCTCTCCACTACGCTAAAGTGATTATATTGATCGAGAAGATTTCATCATCACCTGACGTATTGATTGATTCTGAAATCAGGGATGATCTGTACAACATGTTACCAACAACGATAAAAACAGCTCTAAGGGCTAAGCTCAAGAGGGGCGGCAAAAGAAAGGCCTCGTCGGGATATTATGATCTTGCAGGAGGATGGAGAGCGGTGGTGACGCAGATTTTAGGATGGTTGGCTCCACTAGCTCATAACATGGTAAGGTGGCATTCTGAGAGGAATTTCGAGAAGGAGCATGCAAATTTCAAGGCACATATCCTACTGGTCCAGACTCTGTACTTTGCAAACCGAGTAAAAGCTGAAGCTGCCATTGTAGAACTTCTTGTTGGGCTAAACTATGTTTGCAGAATTCATCAGCAAGCTGGCTTAAGAGATTCGACTGAATTGTGA 1572 0.4319 MRGDMMNGSWISAMRAVSLKSASDDKAVMGILASEVSSLMLKVVNLWNSLSDVEVMSLREEIVNSLGVKMLVSNDDSYLMELALNEILNNFQCLARSVGRLSKRCENPVYRRYKQFVDDPVGNCFQWSGWEYRWKKMDRKVKKMERFAAAMSQLSQELEVLAERERTFRRMWANPESSRAKLLEFKKKVKLHREEVKTLRDMSPWNKSYDYIVRLLTRSLFTILERVVHVFGNYPQRPIEHLEDDSEWFNSVPLRRTRSFASPMHFFVHQAQNDPNELDTEQLGWRHVVDNSKGKKKQQQALHLEIKHLGYVGPSKGCGSVETDSPVVPSCRGATKGGSVRTNDNSFIFNRISIYSKLSIHSGSSRPLPFTLGDASLALHYAKVIILIEKISSSPDVLIDSEIRDDLYNMLPTTIKTALRAKLKRGGKRKASSGYYDLAGGWRAVVTQILGWLAPLAHNMVRWHSERNFEKEHANFKAHILLVQTLYFANRVKAEAAIVELLVGLNYVCRIHQQAGLRDSTEL 523
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele15g0718 523 Coils Coil 144 164 - -
Lele15g0718 523 PANTHER BNAC09G50660D PROTEIN 20 515 - -
Lele15g0718 523 Pfam Protein of unknown function (DUF668) 371 462 IPR007700 GO:0045927
Lele15g0718 523 Pfam Domain of unknown function (DUF3475) 31 87 IPR021864 GO:0045927
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele15g0718 Lele-ChrLele15 4138151 4139722 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele05g1120 05 7001442 7003148 Lele15g0718 15 4138151 4139722 CCT
Lele13g1695 13 25572978 25575586 Lele15g0718 15 4138151 4139722 hybridization
Lele14g1638 14 23965682 23967319 Lele15g0718 15 4138151 4139722 hybridization