Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele07g1163 ATGGGGGGTGAAACGGCGAACGGGTCCTGGTTCAGTGTATTTTGGCCTGTCTCTCGCAAAACTGCACTTGACAACAAGGCGTCAATTGGAATTTTGGCATCAGAAGTTGCCAGCTTGATGCAAAAAGTGGTCAATTTATGGCGTTCACTGAGTGATATGGAGGTAATGGGTCTGAAAGAAGAGATTATAAATTCAGTTGGGCTTAAGATTCTGGTGTCTGATAATGATGATTTCTTAATGGAACTTGCATTGAATGAGATACTTGATAATTTTGAATATCTCGCAAGGTCTGTGGCTAGGTTGGGTAAGAGGTGCACTGATCCGGTATACCATCGTTTTGAACTTTTTGTTGATAACCCGGCCCAGTATAGTTTTCAGTGGTCTGGATGGGAATATAAATCTAAAAAGATGGAAAAGAAGGTGAAAAAAATGGAAAGATTTGCTACTGCTATGACACAATTGTCCCAAGAGCTCGAGGTACTTGCTGAGCTTGAACAAACATTCAGGAGAATGCAGGCAAATCCTGAGCCGAGCCGAGTGAAATTGCTTGAGTTCCAGAAAAAGGTCAGTTGGCAGCGCCAAGAAGTGAAAAATATTAGACACATGTCCCCTTGGAATAGAAGTTATGATTATATTGTCCGGTTGCTGGCGAAATCACTCTTAACAATACTTGAGAGGATTATACATGTTTACGGAAATAGTCATCTGTCAACTCAGCAACAGAATGATTGTCCGGATATGGATGCTAGCCGTCTTCCACGCAGCCATTCCTTTTCTGTTCCAATGCATTCTTCTTTTCACCCATCATATAATCAGTTTTATGGATTTCATTCAGAACCACTTGGGAGCAGGCCAGTGTCAAACTCAGACTCTGTAACTGAAAAGAGCAAAAGAGCAACCATGCTTCAACAAGCTCTTAATGCGCCCACTTTACGTGGAAAGCATCTTCGTTCGGCGAGCAAACAGTTAGTTCATATTGGTCCCTTCAAAGGATGCATGTGGGTAGGAAATGAGTCTCCTGTTGTACAGAGCTGCATGCCAACAACTGGAGGTTCTATGAGGTTGAATGACTGCCATATGAAAAGTGTTGATAAAATGAACATTGTGGATAAATTCTCTCTCTCTTGTAGGAATAGAATATTTTCTAAATTATCCATCAAAGGTCGATTAAAGCCACCTCCAATTACCCTCGGCGATTCTGCTTTGGCTCTTCATTATGCAAATGTTATTATATTAATAGAGAGAATGGTATCATCGCCTCACTTGGTTGACCTTGAAACTAGAGATGATCTGTATAATATGTTACCAGCAGCCATGAGAAGTGCTCTGAGAGCTAAGCTTAAGTGGTGCACCAAAAGTAAGGATTCTTCTTTCTATGATGCTAATCTTGCAGAAGGATGGATTCAGGCACTAGCACAAATACTAGAATGGTTGGCCCCACTCGCTCATAACATGATAAAATGGCATTCTGAGAGGAATTTTGAGAAGGAGTACACCACTTCAAAAGCAAATGTTTTACTTGTCCAAACTCTTTACTTTGCAAACCAACCAGAAACTGAATCTGCAATGATAGAGCTTCTTGTCGGCCTGAATTACGTATGCAGGATTGATAGAGAAATTGGCAGAAGAGATACGGCTGAGCTTGGTGGTGCTAGATCTTGTAATGGTGTTTGTTTGGAAAAGAATGATATCTACAATGAATATGCTTAG 1710 0.4094 MGGETANGSWFSVFWPVSRKTALDNKASIGILASEVASLMQKVVNLWRSLSDMEVMGLKEEIINSVGLKILVSDNDDFLMELALNEILDNFEYLARSVARLGKRCTDPVYHRFELFVDNPAQYSFQWSGWEYKSKKMEKKVKKMERFATAMTQLSQELEVLAELEQTFRRMQANPEPSRVKLLEFQKKVSWQRQEVKNIRHMSPWNRSYDYIVRLLAKSLLTILERIIHVYGNSHLSTQQQNDCPDMDASRLPRSHSFSVPMHSSFHPSYNQFYGFHSEPLGSRPVSNSDSVTEKSKRATMLQQALNAPTLRGKHLRSASKQLVHIGPFKGCMWVGNESPVVQSCMPTTGGSMRLNDCHMKSVDKMNIVDKFSLSCRNRIFSKLSIKGRLKPPPITLGDSALALHYANVIILIERMVSSPHLVDLETRDDLYNMLPAAMRSALRAKLKWCTKSKDSSFYDANLAEGWIQALAQILEWLAPLAHNMIKWHSERNFEKEYTTSKANVLLVQTLYFANQPETESAMIELLVGLNYVCRIDREIGRRDTAELGGARSCNGVCLEKNDIYNEYA 569
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele07g1163 569 Coils Coil 154 174 - -
Lele07g1163 569 Pfam Domain of unknown function (DUF3475) 31 87 IPR021864 GO:0045927
Lele07g1163 569 Pfam Protein of unknown function (DUF668) 396 487 IPR007700 GO:0045927
Lele07g1163 569 PANTHER BNAC09G50660D PROTEIN 23 545 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele07g1163 Lele-ChrLele07 7036939 7038648 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele07g1163 07 7036939 7038648 Lele07g1163 07 7036939 7038648 ECH
Lele05g1120 05 7001442 7003148 Lele07g1163 07 7036939 7038648 hybridization
Lele06g0984 06 6114259 6118109 Lele07g1163 07 7036939 7038648 hybridization