Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele08g0972 ATGGGGGGTGAAACGGCAAACGGGTCATGGTTCAGCGTATTTTGGCCTGTCTCTCGCAAGACCGCGCTTGACAACAAGGCGTCAATCGGAATTTTGGCATCAGAAGTTGCCAGCTTGATGCTAAAAGTGGTCAATTTATGGATTTCTCTGAGTGATATGGAGGTAATGAATCTGAAAGAAGAGATTATGAATTCAGTTGGGCTTAAGATTCTGGTGTCTGATAATGATGATTTCTTAGTGGAACTTGCATTGAATGAGATACTTGATAATTTTGAATATCTCGCAAGGTCCGTGGCCAGGTTGGGTAAAAGGTGCACTGATCCGGTATACCATCGCTTTGAACTTTTTGTCGATAACCCGGCGCAGTATAGTTTTCAATGGTCTGGATGGGAATATAAATATAAAAAGATGGAAAAGAAGGTGAAAAAAATGGAAAGATTTGCTGCTGCTATGACACAATTGTCCCAAGAGCTAGAGGTACTTGCTGAGCTTGAACAAACATCCCGGAGTATGCAGGCAAATCCCGAGCAGAGCCGAGTGAAGTTGCTTGAGTTCCAGAAAAAGGTCAATTGGCAGCGCCAAGAAGTGAAAAATCTTAGACACATGTCTCCTTGGAATAGAAGTTATGACTATATTGTCCGTTTGCTGGCAAAATCTCTCTTAACAATACTCGAGAGGATCATACATGTTTACGGAAATAGTCATCTGTCAACTCAGCAACCGAATGAATGTTCGGATATGGATGCTAGCCATCTTCCACGCAGCCATTCCTTTTCTGTTCCAATGCATTCTTCTTTTCACCCATCATATAATCAGTTTCATGGATTTCATTCAGAACCACTTGGGAGCAGGCCAGTGTCAAACTCGGACGCTGTAACTGACAAGAGCAAAAGAGCAAACACACTTCAACAAGCTCTTAATGCACCCGCTTTACGTGGAAAGCATCTTCGTTCAGCAAGCAAACAGTTAGCTCATATTGGTCCCTTCAAAGGATGCATGTGGGTAGGAAATGAGTCTCCTGTTGTACAGAGCTGCATGCCAACAACCGGAGGTTCTATGAGGTTGAATGACTGCCATATGAAAAGTGTTGATAAAATGAACATTGTGGATAAATTATCGCTGTCTTGTAGGAATAGAATATATTCTAAATTATCCATCAAAGGTCTCTTAAAGCCACCTCCAATTACCCTTGGCGATTCTGCTTTGGCTCTTCATTATGCGAATGTTATTATATTAATAGAGAGAATGGTATCATCGCCTTACTTGGTTGACCTTGAAACTAGAGATGATCTGTATAATATGTTACCACCAGCCATGAGAAGTGTTCTGAGAGCTAAGCTTAAGTGGTGCACCAAAAGCAAGGATTCTTCTTTCTATGATGCTAATCTTGCAGAAGGATGGATTCAGGCTCTCGCACAAATACTAGAATGGTTGGCCCCACTCGCTCATAACATGATAAAATGGCATTCTGAGAAGAATTTCGAGAAGGAGTACACCCCTTCAAAAGCAAATGTTTTACTTGTCCAAACTCTTTATTTTGCAAACCAACCAAAAACTGAAGCTGCAATGATAGAGCTTCTTGTTGGCTTGAATTACGTATGCAGGATTGATAGAGAAATTGGCAGAAGAGATACGGCTGAGTTTGCTGGTGCTAGATCTTGTAATGGGGTTTGTTTGGGGAAGAATGATATCTGTAATGAATATGCATAG 1710 0.4135 MGGETANGSWFSVFWPVSRKTALDNKASIGILASEVASLMLKVVNLWISLSDMEVMNLKEEIMNSVGLKILVSDNDDFLVELALNEILDNFEYLARSVARLGKRCTDPVYHRFELFVDNPAQYSFQWSGWEYKYKKMEKKVKKMERFAAAMTQLSQELEVLAELEQTSRSMQANPEQSRVKLLEFQKKVNWQRQEVKNLRHMSPWNRSYDYIVRLLAKSLLTILERIIHVYGNSHLSTQQPNECSDMDASHLPRSHSFSVPMHSSFHPSYNQFHGFHSEPLGSRPVSNSDAVTDKSKRANTLQQALNAPALRGKHLRSASKQLAHIGPFKGCMWVGNESPVVQSCMPTTGGSMRLNDCHMKSVDKMNIVDKLSLSCRNRIYSKLSIKGLLKPPPITLGDSALALHYANVIILIERMVSSPYLVDLETRDDLYNMLPPAMRSVLRAKLKWCTKSKDSSFYDANLAEGWIQALAQILEWLAPLAHNMIKWHSEKNFEKEYTPSKANVLLVQTLYFANQPKTEAAMIELLVGLNYVCRIDREIGRRDTAEFAGARSCNGVCLGKNDICNEYA 569
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele08g0972 569 Coils Coil 144 174 - -
Lele08g0972 569 PANTHER BNAC09G50660D PROTEIN 23 546 - -
Lele08g0972 569 Pfam Protein of unknown function (DUF668) 396 487 IPR007700 GO:0045927
Lele08g0972 569 Pfam Domain of unknown function (DUF3475) 31 87 IPR021864 GO:0045927
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele08g0972 Lele-ChrLele08 6174712 6176421 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele08g0972 08 6174712 6176421 Lele08g0972 08 6174712 6176421 ECH
Lele05g1120 05 7001442 7003148 Lele08g0972 08 6174712 6176421 hybridization
Lele06g0984 06 6114259 6118109 Lele08g0972 08 6174712 6176421 hybridization