Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele14g1638 ATGAATGGGTCATGGATCAGTGCTATGCGGGCTGTCTCCCGTAAGTCTACATCAGATGACAAGGTTGTGATAGGAATTTTGGCGTTAGAAGTCGCTAGCTTGATGTTGAAGGTGGTTAACTTATGGAACTCTTTGAGTGACGTCGAGGTAATGAATTTGAGGGAGGAAATAGTAAACTCACTTGGGGTCAAAACGCTGGTTTCTAACGATGATAGTTTCTTGATGGAACTTGTATTGAATGAGATACTCAATACCTTCCAATGCCTAGCAAGGTCCGTGGGCAGGTTGAGTAAGAGGTGCGAGAATCCAGTGTATCGTCGTTATGAACAGTTCGTGGACGATCCAGTTGGGAATTGTTTTCAATGGTCAGGGTGGGAATATAGATGGAAAAAGATGGACAAGAAGATAAAGAAAATGGAAAGGTTTGCAGCAGCTATGTCACAATTGTCTCAGGAGCTTGAAATCTTGGAAGAGCGAGAACGGACTTCAAGGAGAATGCGGGCAAATCCTGGGTCGAGTCGAGTCAAATTGCTCGAGTTTAAGAAAAAGATCAAGTTGCATCGCGAAGAAGTAAAAACTCTGAGAGACATGTCTCCGTGGAATAGAAGTTATGACTATATTGTCCGCTTGTTGACAAGATCACTATTTACAATTCTAGAGAGGATCGTACATGTCTTTGGAAATTATCCTCAGCAGCCAATTGAACAGCTAGAAGATGATTCCGAATGGTTCCATAGTGTTCCCCTTCGACGGACTCGTTCCTTCGCTTCTCCTACGCATGTTTTTGTCCATCAACCGGACGAGTTGGATACAGAACAACTTGGGTGGAGGCATAGGTTAAACTCAGGGCATGTCGTTAACAATAGCAAAGGAAACAAGAAACAGCAACAAGCTCTTCATTTAGAAATCAAGCACTTGGGTTATGTCGGTCCTTTCAAAGGATGCGGGTCGGTAGACACGGATTCTCCCTTTGTACCAAGTTGTAGGGGGGCAACAAAGGGTGGCTTTATGAGGACAAATGATTACCAAATGAAACATGTTGGCAAAATCAAGACAGCAGATAATTCATTTATATTCAACAGGATAAGCATATGTTCCAAACTATCCATCAATAGTGAATCATCATCAAGACCACTTCCGTTTACTCTCGGTGATGCTGCTTTAGATCTCCACTACGCCAAAGTGATTATATTGATAGAGAAGATTGAATCGTCACCTGACATGATTAGGGAATCTGAAATCAGGGATGATCTGTACAACATGTTACCAACAACGATAAAAACTGCTCTGAGGGCTAAGCTCAAGAGGGGCTGTAAAAGAAAGGTTTATTCCTCGGGAAATGACCTTGCAGGAGGATGGAGAGTGGTGGTGACGCAGATTTTAGGATGGTTGGCTCCGTTGGCTCATAACATGGTAAGTTGGCATTCTGAGAGGAATTTCGAGAAGGAGCATGCAAATTTCAAGGCAAATATCCTACTGGTACAGACTCTTTACTTTGCAAACCGAGCAAAAGCTGAAGCTGCCATTGTAGAACTTCTTGTTGGTCTAAACCATGTTTGCAGAACTTATCAGCAAGATGGCTTAAGAGATTCGCCTGAGTTTATTGGGAATGGCTCTCGTAACGTCGTTGGGACATGA 1638 0.4298 MNGSWISAMRAVSRKSTSDDKVVIGILALEVASLMLKVVNLWNSLSDVEVMNLREEIVNSLGVKTLVSNDDSFLMELVLNEILNTFQCLARSVGRLSKRCENPVYRRYEQFVDDPVGNCFQWSGWEYRWKKMDKKIKKMERFAAAMSQLSQELEILEERERTSRRMRANPGSSRVKLLEFKKKIKLHREEVKTLRDMSPWNRSYDYIVRLLTRSLFTILERIVHVFGNYPQQPIEQLEDDSEWFHSVPLRRTRSFASPTHVFVHQPDELDTEQLGWRHRLNSGHVVNNSKGNKKQQQALHLEIKHLGYVGPFKGCGSVDTDSPFVPSCRGATKGGFMRTNDYQMKHVGKIKTADNSFIFNRISICSKLSINSESSSRPLPFTLGDAALDLHYAKVIILIEKIESSPDMIRESEIRDDLYNMLPTTIKTALRAKLKRGCKRKVYSSGNDLAGGWRVVVTQILGWLAPLAHNMVSWHSERNFEKEHANFKANILLVQTLYFANRAKAEAAIVELLVGLNHVCRTYQQDGLRDSPEFIGNGSRNVVGT 545
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele14g1638 545 PANTHER BNAC09G50660D PROTEIN 19 525 - -
Lele14g1638 545 Coils Coil 177 197 - -
Lele14g1638 545 Pfam Domain of unknown function (DUF3475) 26 82 IPR021864 GO:0045927
Lele14g1638 545 Pfam Protein of unknown function (DUF668) 382 472 IPR007700 GO:0045927
Lele14g1638 545 Coils Coil 132 166 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele14g1638 Lele-ChrLele14 23965682 23967319 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele05g1120 05 7001442 7003148 Lele14g1638 14 23965682 23967319 CCT
Lele14g1638 14 23965682 23967319 Lele15g0718 15 4138151 4139722 hybridization
Lele14g1638 14 23965682 23967319 Lele16g0725 16 4081194 4082846 hybridization