Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele16g0725 ATGAGGGGTGACATGATAAATGGGTCGTGGATCAGTGCTATGCGGGCTGTCTCCCGTAAGTCTGCATCAAATGACAAGTCTGTGATAGGAATTTTGGCGTCAGAAGTCGCTAGCTTGATGTTGAAGGTGGTTAACTTATGGAACTCTTTGAGTGACATCGAGGTAATGAATTTGAGGGAGGAAATAGTAAACTCATTTGGGGTCAAAATGCTGGTTTCTAACGATGATAGTTTCTTGATGGAACTTGCATTGAATGAGATACTCAATAACTTCCAATGCCTAGCAAGGTCCGTAGGCAGGTTGAGTAAGAGGTGCGAGAATCCAGTGTATCGTCGTTATGAACAGTTCGTAGACGATCCAGTTGGGAATTGTTTTCAATGGTCAGGTTGGGAATATAGATGGAAAAAGATGGACAAGAAGATAAAGAAAATGGAACGATTTGCAGCAGCTATGTCACAATTGTCTCAGGAGCTTGAAATCTTGGAAGAGCGAGAACGGACTTCGAGGAGAATGCGGGCAAATCCTGGGTCGAGTCTAGTCAAATTGCTCGAGTTTAAGAAAAAGGTCAAGTTGCATCGCGAAGAAGTAAAAACTCTGAGAGACATGTCTCCGTGGAATAGAAGTTATGACTATATTGTCCGCTTGTTGGCAAGATCACTATTTACAATTCTCGAGAGGATCGTCCATGTCTTTGGAAATTATCCTCAGCAGCCAATTGAGCAGCTAGAAGATGATTCCGAATGGTTCCATAGCGTCCCCCTTCGACGGACTCGTTCCTTCGCTTCTCCTACGCATTTTTTTGTCCATCAACCAGACGAGTTGGATACAGAACAACTTGGGTGGAGGCATAGGTTAAACCCAGGGCATGTCGTTGACAATAGCAAAGGAAACAAGAAACAGCAACAAGCTCTTCATTTAGAAATCAAGCACTTGGGTTATGTCAGTTCTTCCAAAGGATGCGGGTCGGTAGACACGGATTCTCCCGTTGTACCAAGTTGTAGGGGGGCAACAAAGGGTGGCTTTATGAGGACAAATGTTTACCAAATGAAACATGTTGGCAAAACCAAGACAGCAGATAATTCATTTATATTCAACAGGATAAGCATATATTCCAAACTATCCATCAATAGTGAATCATCATCAAGACCACTTCCGTTTACTCTTGGTGATGCTGCTTTAGCTCTCCACTACGCCAAAGTGATTATATTGACAGAGAAGATTGCATCGTCACCTGACATGATTAGTGAATCTGAAATCAGGGATGATCTGTACAACATGTTACCAACAACGATAAAAACTGCTCTGAGGGGTAAGCTCAAGAGGGGATGTAAAAGAAAGGTTTATTCCTTGGGAAATGACCTTGCAGGAGGATGGAGAGTGGTGGTGACGCAGATTTTAGGATGGTTGGCTCCGTTGGCTCATAACATGGTAAGTTGGCATTCTGAGAGGAATTTCGAGAAGGAGCATGCAAATTTCAAGGCAAATATCCTACTGGTCCAGACTCTTTACTTTGCAAACCGAGCAAAAGCTGAAGCTGCCATTGTAGAACTTCTTGTTGGTCTAAACTATGTTTGCAGAACTTATCAGCAAGATGGCTTAAGAGATTCACCTGAGTTTATTGGGAATGGCTCTCGTAACGTCGTTAGTACATGA 1653 0.4295 MRGDMINGSWISAMRAVSRKSASNDKSVIGILASEVASLMLKVVNLWNSLSDIEVMNLREEIVNSFGVKMLVSNDDSFLMELALNEILNNFQCLARSVGRLSKRCENPVYRRYEQFVDDPVGNCFQWSGWEYRWKKMDKKIKKMERFAAAMSQLSQELEILEERERTSRRMRANPGSSLVKLLEFKKKVKLHREEVKTLRDMSPWNRSYDYIVRLLARSLFTILERIVHVFGNYPQQPIEQLEDDSEWFHSVPLRRTRSFASPTHFFVHQPDELDTEQLGWRHRLNPGHVVDNSKGNKKQQQALHLEIKHLGYVSSSKGCGSVDTDSPVVPSCRGATKGGFMRTNVYQMKHVGKTKTADNSFIFNRISIYSKLSINSESSSRPLPFTLGDAALALHYAKVIILTEKIASSPDMISESEIRDDLYNMLPTTIKTALRGKLKRGCKRKVYSLGNDLAGGWRVVVTQILGWLAPLAHNMVSWHSERNFEKEHANFKANILLVQTLYFANRAKAEAAIVELLVGLNYVCRTYQQDGLRDSPEFIGNGSRNVVST 550
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele16g0725 550 PANTHER BNAC09G50660D PROTEIN 23 530 - -
Lele16g0725 550 Pfam Protein of unknown function (DUF668) 387 477 IPR007700 GO:0045927
Lele16g0725 550 Coils Coil 137 171 - -
Lele16g0725 550 Pfam Domain of unknown function (DUF3475) 31 87 IPR021864 GO:0045927
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele16g0725 Lele-ChrLele16 4081194 4082846 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele05g1120 05 7001442 7003148 Lele16g0725 16 4081194 4082846 CCT
Lele13g1695 13 25572978 25575586 Lele16g0725 16 4081194 4082846 hybridization
Lele14g1638 14 23965682 23967319 Lele16g0725 16 4081194 4082846 hybridization