Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele05g0234 ATGGGGTCTGAATGTCCTCCAGCAACTGTAACTGTTCATGTTACAGGCTTCAAGAAATTCCATGGAGTTTCAGAGAATCCGACGGAGTCAATTGTCAATAACTTGACGGAGTATATGAAGAAGAAGGGTTTGCCTAAAGGTTCAGTTATTGGGAGCTGTAACATTCTGGAGACTGCTGGTCAAGGAGCACTTCTGCACTTTGGGGTTAACAGTGGAGCAACCAGGTTTGCCTTAGAGCAGCATCAAGCTGTCAACGAGGCTACTCTCCGTAGCCCTGATGAAATGGGATGGAAGCCTCAGAAAGTCCCAATTGTTCCTTCGGATGGCGGAATCATGCGAACACGCGAGGTACATTTTGTACTTTTAAGCTTAAAGCCTAGTGCTTACACTGACTACCTCCCTGTAGAGGACATTTCAAAGGAATCGGCAAAGAAGGGTTATGATGTGATGACATCGGACGATGCTGGCAGGTTCGTGTGCAATTACGTGTACTATCACTCGCTTCGTTTCACAGAGCAAAATGGGATAAAATCCCTGTTTGTGCATGTGCCTCTGTTCTTGACAATAGATGAGGAGACCCAAATGCAATTCATTGCTTCCTTGTTGGAGGAATGTAACTTGACTGGAAAAGTTAATGAAATGTGCATATGTAGCACTCAGGCGTTTGCTTTGGTATCGGCAAATTGTCCAAGACAAGTTGACATCTTCCATGCATTACGTCCTGTAAAACTAAACTGCTCGTGTTTTAGAATGTAA 756 0.4431 MGSECPPATVTVHVTGFKKFHGVSENPTESIVNNLTEYMKKKGLPKGSVIGSCNILETAGQGALLHFGVNSGATRFALEQHQAVNEATLRSPDEMGWKPQKVPIVPSDGGIMRTREVHFVLLSLKPSAYTDYLPVEDISKESAKKGYDVMTSDDAGRFVCNYVYYHSLRFTEQNGIKSLFVHVPLFLTIDEETQMQFIASLLEECNLTGKVNEMCICSTQAFALVSANCPRQVDIFHALRPVKLNCSCFRM 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele05g0234 251 PANTHER PROTEASE FAMILY C15 PYROGLUTAMYL-PEPTIDASE I-RELATED 9 64 IPR016125 -
Lele05g0234 251 SUPERFAMILY Pyrrolidone carboxyl peptidase (pyroglutamate aminopeptidase) 11 204 IPR036440 -
Lele05g0234 251 FunFam Pyrrolidone-carboxylate peptidase isoform A 63 207 - -
Lele05g0234 251 Gene3D - 10 216 IPR036440 -
Lele05g0234 251 PRINTS Pyroglutamyl peptidase I (C15) family signature 12 35 IPR000816 GO:0005829|GO:0006508|GO:0016920
Lele05g0234 251 PRINTS Pyroglutamyl peptidase I (C15) family signature 149 165 IPR000816 GO:0005829|GO:0006508|GO:0016920
Lele05g0234 251 PRINTS Pyroglutamyl peptidase I (C15) family signature 177 189 IPR000816 GO:0005829|GO:0006508|GO:0016920
Lele05g0234 251 CDD Peptidase_C15 10 203 IPR000816 GO:0005829|GO:0006508|GO:0016920
Lele05g0234 251 Pfam Pyroglutamyl peptidase 12 186 IPR016125 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele05g0234 Lele-ChrLele05 1307761 1309135 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele05g0234 05 1307761 1309135 Lele13g2201 13 28451886 28453261 CCT
Lele05g0234 05 1307761 1309135 Lele14g2137 14 26840404 26842807 CCT
Lele05g0234 05 1307761 1309135 Lele15g0212 15 1217946 1219326 CCT
Lele05g0234 05 1307761 1309135 Lele16g0221 16 1229845 1231200 CCT
Lele13g2209 13 28494771 28495973 Lele05g0234 05 1307761 1309135 CCT
Lele15g0202 15 1179754 1181496 Lele05g0234 05 1307761 1309135 CCT
Lele16g0211 16 1185313 1187534 Lele05g0234 05 1307761 1309135 CCT
Lele05g0234 05 1307761 1309135 Lele05g0234 05 1307761 1309135 ECH
Lele05g0234 05 1307761 1309135 Lele07g0244 07 1339266 1339844 hybridization
Lele05g0234 05 1307761 1309135 Lele08g0049 08 316439 317915 hybridization